HHsearch alignment for GI: 254780903 and conserved domain: COG0642
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=100.00 E-value=8.4e-34 Score=262.00 Aligned_cols=214 Identities=36% Similarity=0.590 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCEEEE
Q ss_conf 99999998767522247899999999860346889938999999999999999999977767788874198-30120331
Q gi|254780903|r 542 TKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEK-ISIDKQNA 620 (766)
Q Consensus 542 ~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~-~~~~~~~~ 620 (766)
T Consensus 114 ~~~~~~~~~~hel~~pl~~~~~~~~~~~~~---~~--~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (336)
T COG0642 114 AKREFLANISHELRTPLTAIRGLLELLLEG---LL--DPQRELLEIIEEEAERLLRLVNDLLDLSRLEAGTKLKLLLELV 188 (336)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHCC---CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 999999999888589799999999997414---65--2599999999999999999999999999764457442234645
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEC
Q ss_conf 69999999999999999847958999808997899868999999999886565346898889999999799899999978
Q gi|254780903|r 621 DLIPIINEGIRLIGSSAQSKNIKIEKKIPSELFFNADKRIIKKILFPILSNSIKFTNNNGKMMIRTSKIGQCVIITIADT 700 (766)
Q Consensus 621 dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~ 700 (766)
T Consensus 189 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~vl~nLi~NAi~~~~-~~~i~i~~~~~~~~i~i~V~D~ 267 (336)
T COG0642 189 DLAELLEEVVRLLAPLAQEKGIELAVDLPELPYVLGDPERLRQVLVNLLSNAIKYTP-GGEITISVRQDDEQVTISVEDT 267 (336)
T ss_pred CHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCEEEEEEECC
T ss_conf 599999999999998766348489982376607860788999999999998998668-9859999996387799999807
Q ss_pred CCCCCHHHHHHHCCCEEECCCCCCCCCC-CCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 8978977854304650531467556778-87616899999999629869999798995299997359
Q gi|254780903|r 701 GIGIPKSALEKIGQPFEPLHNQYDQSIG-GFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 701 G~GI~~e~~~~iF~pF~q~~~~~t~~~~-GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 268 G~Gi~~~~~~~if~~~~~~-----~~~~~g~GlGL~i~~~~~~~~~g~i~~~~~~~~Gt~~~i~lP~ 329 (336)
T COG0642 268 GPGIPEEELERIFEPFFRT-----DKSRSGTGLGLAIVKRIVELHGGTISVESEPGKGTTFTIRLPL 329 (336)
T ss_pred CCCCCHHHHHHHHCCCCCC-----CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEEEC
T ss_conf 8997988999881886347-----9998988632999999999879989995079997799999847