HHsearch alignment for GI: 254780903 and conserved domain: COG2972
>COG2972 Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].
Probab=99.65 E-value=5.1e-13 Score=111.90 Aligned_cols=179 Identities=26% Similarity=0.261 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHH
Q ss_conf 99876752224789999999986034688993899999999999999999997776778887419830120331699999
Q gi|254780903|r 547 LAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADLIPII 626 (766)
Q Consensus 547 la~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl~~~i 626 (766)
T Consensus 263 sqi~pHfL~NtL~~I~~~~~~~~--------~---~~~~~~v~~l~~llR------~~l~~--------~~~~~~l~~E~ 317 (456)
T COG2972 263 SQINPHFLYNTLETIRMLAEEDD--------P---EEAAKVVKALSKLLR------YSLSN--------LDNIVTLEIEL 317 (456)
T ss_pred HCCCCHHHHHHHHHHHHHHHHCC--------H---HHHHHHHHHHHHHHH------HHHHC--------CCCCCCHHHHH
T ss_conf 21261689999999999987357--------9---999999999999999------75006--------55534199999
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCE---E-EECHHHHHHHHHHHHHHHHHCC----CCCCEEEEEEEEECCEEEEEEE
Q ss_conf 999999999998479589998089978---9-9868999999999886565346----8988899999997998999999
Q gi|254780903|r 627 NEGIRLIGSSAQSKNIKIEKKIPSELF---F-NADKRIIKKILFPILSNSIKFT----NNNGKMMIRTSKIGQCVIITIA 698 (766)
Q Consensus 627 ~~~~~~~~~~~~~k~i~l~~~~~~~l~---v-~~D~~~l~QVl~NLi~NAik~t----~~~g~I~i~~~~~~~~v~i~V~ 698 (766)
T Consensus 318 ~~~~kyl~--iq~~r~~~~le~~~~i~~~~~~l~~p---~l~lqpLvENAi~hgi~~~~~~~~I~i~~~~~~~~i~i~i~ 392 (456)
T COG2972 318 LLIEKYLE--IQKLRIGDRLEVPLPIDEELEPLIDP---KLVLQPLVENAIEHGIEPKRPGGSIAISAKKQDDVIQISIS 392 (456)
T ss_pred HHHHHHHH--HHHCCCCEEEEEEECCCCCCCCCCCH---HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEC
T ss_conf 99999999--99819987999972037533202327---88988879999998620469995799999405879999977
Q ss_pred ECCCCCCHHHHHHHCCCEEECCCCCCCCCCC-CCHHHHHHHHHHHHCCCE--EEEEEECCCCEEEEEECCC
Q ss_conf 7889789778543046505314675567788-761689999999962986--9999798995299997359
Q gi|254780903|r 699 DTGIGIPKSALEKIGQPFEPLHNQYDQSIGG-FGLGLAISDALTNLHGGR--LKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 699 D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~G-tGLGLaI~k~iVe~hgG~--I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 393 Dng~g~~~~~~~~~~~-----------~~~~r~giGL~Nv~~rl~~~~g~~~~~i~s~~~~gt~v~~~~~~ 452 (456)
T COG2972 393 DNGPGIDEEKLEGLST-----------KGENRSGIGLSNVKERLKLYFGEPGLSIDSQPGKGTFVQIIIPK 452 (456)
T ss_pred CCCCCCCHHHHHHHHH-----------CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEH
T ss_conf 6999958788866764-----------15777773588799999871897621799964895899999863