HHsearch alignment for GI: 254780903 and conserved domain: PRK09776
>PRK09776 putative sensor protein; Provisional.
Probab=100.00 E-value=3.2e-32 Score=250.59 Aligned_cols=255 Identities=12% Similarity=0.165 Sum_probs=207.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHH-HHH
Q ss_conf 9999999999999999999999722597459897689789997889977299943305898899976081205899-999
Q gi|254780903|r 239 QAKKNKENDTILLEANICVETALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYDNKKIC-EIA 317 (766)
Q Consensus 239 dit~~r~ae~~l~ese~rl~~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPdDr~~~-~~a 317 (766)
T Consensus 288 ~~~~~r~~~~~l~~SE~rfR~~~e~saiGmAlV~~dGr~l~VN~alc~mlGYs~~ELl~--ltf~diThPdDl~~dl~~~ 365 (1116)
T PRK09776 288 VMYAFRAERKHISESETRFRNAMEYSAIGMALVGTEGQWLQVNKALCQFLGYSQEELRG--LTFQQLTWPEDLNKDLQQV 365 (1116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECHHHHHHHCCCHHHHHH--CCHHHHCCCCCHHHHHHHH
T ss_conf 99999988888776799999998746664699868981898169999884989999852--9898816962177789999
Q ss_pred HHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCEE-EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
Q ss_conf 99972489848999998869898899889999998379606-99999844617999999999999999999985445515
Q gi|254780903|r 318 RSVTGKHVKQLDQIFHMRHASGADIWIQVRAQMMRTISGGM-NIIGIAMDLTEKYHLEKRYAEADQRLSKAIECTSEALV 396 (766)
Q Consensus 318 ~~~~~~~~~~~~~e~Ri~~~DG~~~Wi~~r~~~i~d~~G~~-~~iGi~~DITErK~ae~~l~ese~rlr~~ie~~~~~i~ 396 (766)
T Consensus 366 ~~LlaGei~~y~lEKRyirkDG~~vW~~ltvSlvRd~~G~p~~fI~~v~DIterK~aE~~lr~l~erl~la~ea~~iGiw 445 (1116)
T PRK09776 366 EKLLSGEINSYSMEKRYYNRDGDVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLMERITLANEAGGIGIW 445 (1116)
T ss_pred HHHHCCCCCCCCCEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99976996645411246736997999998999997699984489999973337799999999999999999862476635
Q ss_pred EECCCCEEEEECHHHHHHHCCCHHHHCCC-CCHHHHCCCHHHHHHHHH--HHCCCCCCCEEEEEEECCC--EEEEECCE-
Q ss_conf 88349969970178988839997894289-717881652013789998--5211245640589991696--28742232-
Q gi|254780903|r 397 LWDKNDRLVMCNANYQKAYGLPDHVLVPG-NARSIIQDAQTRPIIEYR--TSDPERSQDMSKEIKLADS--RWLQINEW- 470 (766)
Q Consensus 397 ~~D~~g~i~~~N~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~dg--~~~~i~~~- 470 (766)
T Consensus 446 e~d~~~~~i~~~~r~~~l~g~~~~~~~~~~~w~~~ihPdD~~~v~~~~~~~l~~~~~~d~E~Rl~~~dG~~r~i~~~a~~ 525 (1116)
T PRK09776 446 EWDLKPNIISWDKRMFELYEIPPHIKPNWQVWYACLHPEDRQRVEKEIRDALQGRSPFKLEFRIVVPDGEIRHIRALANR 525 (1116)
T ss_pred EEECCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEE
T ss_conf 52056650211378999848882226688999872391568999999999971588756046788479978999862148
Q ss_pred -ECCCCC---EEEEEEEEEHHHCCCCCCC
Q ss_conf -456997---8999886201000112232
Q gi|254780903|r 471 -CTHDGG---TISVGTDITLLKHNQAQLR 495 (766)
Q Consensus 471 -~~~dg~---~v~v~~~i~~~~~~~~~~~ 495 (766)
T Consensus 526 ~~d~~G~~~r~~G~~~DITe~K~~eeaL~ 554 (1116)
T PRK09776 526 VLNKDGEVERLLGINMDMTEVRQLNEALF 554 (1116)
T ss_pred EECCCCCEEEEEEEEECCCHHHHHHHHHH
T ss_conf 98689988988731323207789999999