HHsearch alignment for GI: 254780903 and conserved domain: PRK09959

>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=97.48  E-value=0.00075  Score=45.72  Aligned_cols=147  Identities=11%  Similarity=0.041  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCC-CHHHHHHHHCCCCHHH
Q ss_conf             888899999999999999999999997225974598976897899978899772999433058-9889997608120589
Q gi|254780903|r  235 SYYRQAKKNKENDTILLEANICVETALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTL-SFRAIARLIHYDNKKI  313 (766)
Q Consensus       235 a~~~dit~~r~ae~~l~ese~rl~~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~-s~~~~~~~vHPdDr~~  313 (766)
T Consensus       556 ~L~r~ir~R~~ae~~L~~ql~f~~~L~d~iP~pi~v~d~~g~~i~~N~a~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~  634 (1197)
T PRK09959        556 YLLRSVRRRKVIQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLEN-SESPFKDVFSN  634 (1197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCC-CCCHHHHHHHH
T ss_conf             99999999999999999889999999836998769982556122411888987523144421356532-22215677777


Q ss_pred             HHHHHHHHHCCCCEEEEEEEEECCCC-CEEEEEEEEEEEEECCCEE-EEEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf             99999997248984899999886989-8899889999998379606-99999844617999999999999999
Q gi|254780903|r  314 CEIARSVTGKHVKQLDQIFHMRHASG-ADIWIQVRAQMMRTISGGM-NIIGIAMDLTEKYHLEKRYAEADQRL  384 (766)
Q Consensus       314 ~~~a~~~~~~~~~~~~~e~Ri~~~DG-~~~Wi~~r~~~i~d~~G~~-~~iGi~~DITErK~ae~~l~ese~rl  384 (766)
T Consensus       635 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~i~~w~~~~~~~~~~~~~~i~gw~DITerk~~e~~L~~Ak~~A  705 (1197)
T PRK09959        635 THEVTAETKENRTIYTQVFEI--DNGIEKRCINHWHTLCNLPASDHAVYICGWQDITETRDLIHALEVERNKA  705 (1197)
T ss_pred             HHHHHHHHHHCCCCCCEEEEC--CCCCCCEEEEEEEEEECCCCCCCEEEECCEEEHHHHHHHHHHHHHHHHHH
T ss_conf             789987531012100014530--57754236775310003764444010115464128999999999999999