HHsearch alignment for GI: 254780903 and conserved domain: PRK10364

>PRK10364 sensor protein ZraS; Provisional.
Probab=100.00  E-value=0  Score=415.49  Aligned_cols=223  Identities=28%  Similarity=0.458  Sum_probs=202.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999887899999999876752224789999999986034688993899999999999999999997776778887
Q gi|254780903|r  529 YQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKI  608 (766)
Q Consensus       529 l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~sri  608 (766)
T Consensus       225 Lq~el~r~EKL-AaLG~LAAgVAHEIRNPLtsI~G~AqlL~~~~~---~~~e~~e~~~iI~~E~~RL~~iI~~LL~faR-  299 (455)
T PRK10364        225 LQDEMKRKEKL-VALGHLAAGVAHEIRNPLSSIKGLAKYFAERAP---AGGEAHQLAQVMAKEADRLNRVVSELLELVK-  299 (455)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             99999999899-999999999899885649999999999867699---9857999999999999999999999998728-


Q ss_pred             HCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCE-EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             419830120331699999999999999998479589998089978-9986899999999988656534689888999999
Q gi|254780903|r  609 ETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSELF-FNADKRIIKKILFPILSNSIKFTNNNGKMMIRTS  687 (766)
Q Consensus       609 eag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~-v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~  687 (766)
T Consensus       300 ---p~~~~~~~vdL~~li~~~l~l~~~~a~~k~I~l~~~~~~~lp~I~~D~~~L~QVl~NLl~NAi~A~~~gg~I~I~~~  376 (455)
T PRK10364        300 ---PTHLALQAVDLNTLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQAIGQHGVISVTAS  376 (455)
T ss_pred             ---CCCCCCCEECHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf             ---99898848849999999999998688648909999738888759888999999999999999997589977999999


Q ss_pred             EECCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC
Q ss_conf             979989999997889789778543046505314675567788761689999999962986999979899529999735
Q gi|254780903|r  688 KIGQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMP  765 (766)
Q Consensus       688 ~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP  765 (766)
T Consensus       377 ~~~~~V~I~V~DnG~GIp~E~l~rIFePFf-----TT-K~~GTGLGLaIv~~IVe~HgG~I~v~S~~G~GT~FtI~LP  448 (455)
T PRK10364        377 ESGAGVKISVTDSGKGIAADQLEAIFTPYF-----TT-KAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGATFTLWLP  448 (455)
T ss_pred             ECCCEEEEEEEECCCCCCHHHHHHHCCCCC-----CC-CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEE
T ss_conf             859989999997699979789878658976-----48-9897028899999999988997999955999879999982