HHsearch alignment for GI: 254780903 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=100.00 E-value=0 Score=586.81 Aligned_cols=337 Identities=24% Similarity=0.346 Sum_probs=297.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHEEEEC-CCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999999985445515883-499699701789888399978942897178816520137899985211245
Q gi|254780903|r 372 HLEKRYAEADQRLSKAIECTSEALVLWD-KNDRLVMCNANYQKAYGLPDHVLVPGNARSIIQDAQTRPIIEYRTSDPERS 450 (766)
Q Consensus 372 ~ae~~l~ese~rlr~~ie~~~~~i~~~D-~~g~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (766)
T Consensus 347 ~~a~~l~e~e~fnr~~i~~apvg~~~l~~~dg~~~~~n~~~~~~~~~~~-------------~~~~-~~~~~~~~---~~ 409 (947)
T PRK10841 347 SNALRLEEHEQFNRKIVASAPVGICILRTSDGTNILSNELAHNYLNMLT-------------HEDR-QRLTQIIC---GQ 409 (947)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHHHCC-------------CCHH-HHHHHHHH---CC
T ss_conf 7788998788877889861771379997068863310389999876237-------------5528-99999986---13
Q ss_pred CCEEEEEEECCCEEEEECCEECCCCC---EEEEEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 64058999169628742232456997---899988620100011223222222211000017889986444579999999
Q gi|254780903|r 451 QDMSKEIKLADSRWLQINEWCTHDGG---TISVGTDITLLKHNQAQLRESKRRLKATINDLSTSRQILERQKTELSIANA 527 (766)
Q Consensus 451 ~~~~~e~~~~dg~~~~i~~~~~~dg~---~v~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 527 (766)
T Consensus 410 ~~~~~~~~~~~~~~l~~~~~~~ry~~~~v~~c~~~Disar-----------------------------------~~~e~ 454 (947)
T PRK10841 410 QVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSAR-----------------------------------VKMEE 454 (947)
T ss_pred CCCCEEEEECCCCEEEEEEEEEEECCCCEEEEEEEECHHH-----------------------------------HHHHH
T ss_conf 7883489935985799998653126860799999854078-----------------------------------99999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999988789999999987675222478999999998603468899389999999999999999999777677888
Q gi|254780903|r 528 KYQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSK 607 (766)
Q Consensus 528 ~l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~sr 607 (766)
T Consensus 455 ~L~~a~~AAE~AN~AKS~FLAnMSHEIRTPLnGIlG~lELL~~t---~L-~~~Qr~~l~tI~~Ss~~LL~lINDILDfSK 530 (947)
T PRK10841 455 SLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTK---EL-PKGVDRLVTAMNNSSSLLLKIISDILDFSK 530 (947)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHCCC---CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998998758564361289999999998079---99-989999999999999999999999999998
Q ss_pred HHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCE--EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 7419830120331699999999999999998479589998089978--99868999999999886565346898889999
Q gi|254780903|r 608 IETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSELF--FNADKRIIKKILFPILSNSIKFTNNNGKMMIR 685 (766)
Q Consensus 608 ieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~--v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~ 685 (766)
T Consensus 531 IEAGkl~Le~~~F~l~~lv~~v~~~~~~~A~~K~L~L~~~idp~vP~~v~GDp~RLrQIL~NLLsNAIKFT~~-G~I~L~ 609 (947)
T PRK10841 531 IESEQLKIEPREFSPREVMNHITANYLPLVVKKQLGLYCFIEPDVPVSLNGDPMRLQQVISNLLSNAIKFTDT-GCIILH 609 (947)
T ss_pred HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHEEECCC-CEEEEE
T ss_conf 8049847985256899999999999999999739879999799999658606889999999988777466799-589999
Q ss_pred EEEECCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC
Q ss_conf 99979989999997889789778543046505314675567788761689999999962986999979899529999735
Q gi|254780903|r 686 TSKIGQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMP 765 (766)
Q Consensus 686 ~~~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP 765 (766)
T Consensus 610 V~~~~~~L~fsV~DTGIGIsee~~~~LFepF~QaD~S~tR~yGGTGLGLAI~krLVeLMGG~I~VeSe~G~GStFtf~LP 689 (947)
T PRK10841 610 VRVDGDYLSFRVRDTGVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLINMMDGDISVDSEPGMGSQFTVRIP 689 (947)
T ss_pred EEECCCEEEEEEEECCCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEE
T ss_conf 99849999999998289989999998847111578754345799874199999999975995899916998079999975