HHsearch alignment for GI: 254780903 and conserved domain: PRK10841
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional.
Probab=98.40 E-value=0.00028 Score=48.79 Aligned_cols=178 Identities=15% Similarity=0.132 Sum_probs=102.7
Q ss_pred CCHHEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 3100001233157782599997423210123455655456878878999999-9988889-9999999999999999999
Q gi|254780903|r 181 QQPYHVLSVNLPHNSGSILIINSRVPLLRLWREEVTLEVVFFSIISALLLFI-LFSYYRQ-AKKNKENDTILLEANICVE 258 (766)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~a~~~d-it~~r~ae~~l~ese~rl~ 258 (766)
T Consensus 282 ~~~~l~~~k~l~~~~~~~vy~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~rr~~~pa~~~a~~l~e~e~fnr 360 (947)
T PRK10841 282 GFRELVLKKNLPPSSLSIVYSVPVDTVLERIRMLILNAILL-NVLSGAVLFTLARMFERRIFIPAESNALRLEEHEQFNR 360 (947)
T ss_pred CHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 81778752448966338999948899887617999999999-99999999999999886642735677889987888778
Q ss_pred HHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCC
Q ss_conf 99722597459897689789997889977299943305898899976081205899999999724898489999988698
Q gi|254780903|r 259 TALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYDNKKICEIARSVTGKHVKQLDQIFHMRHAS 338 (766)
Q Consensus 259 ~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPdDr~~~~~a~~~~~~~~~~~~~e~Ri~~~D 338 (766)
T Consensus 361 ~~i~~apvg~~~l~~~dg~~~~~n~~~--------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~--~~~~~ 420 (947)
T PRK10841 361 KIVASAPVGICILRTSDGTNILSNELA--------------HNYLNMLTHEDRQRLTQ---IICGQQVNFV-D--VLTSN 420 (947)
T ss_pred HHHHHCCCEEEEEECCCCCEEECHHHH--------------HHHHHHCCCCHHHHHHH---HHHCCCCCCE-E--EEECC
T ss_conf 898617713799970688633103899--------------99876237552899999---9861378834-8--99359
Q ss_pred CCEEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 98899889999998379606999998446179999999999999
Q gi|254780903|r 339 GADIWIQVRAQMMRTISGGMNIIGIAMDLTEKYHLEKRYAEADQ 382 (766)
Q Consensus 339 G~~~Wi~~r~~~i~d~~G~~~~iGi~~DITErK~ae~~l~ese~ 382 (766)
T Consensus 421 ~~~l~--~~~~~~ry~-~~~v~~c~~~Disar~~~e~~L~~a~~ 461 (947)
T PRK10841 421 NTNLQ--ISFVHSRYR-NENVAICVLVDVSARVKMEESLQEMAQ 461 (947)
T ss_pred CCEEE--EEEEEEEEC-CCCEEEEEEEECHHHHHHHHHHHHHHH
T ss_conf 85799--998653126-860799999854078999999999999