HHsearch alignment for GI: 254780903 and conserved domain: PRK11073

>PRK11073 glnL nitrogen regulation protein NR(II); Provisional.
Probab=98.55  E-value=3.5e-06  Score=62.52  Aligned_cols=118  Identities=11%  Similarity=0.077  Sum_probs=80.8

Q ss_pred             HHHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEEECC
Q ss_conf             99972259745989768978999788997729994330589889997608120589999999972489848999998869
Q gi|254780903|r  258 ETALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYDNKKICEIARSVTGKHVKQLDQIFHMRHA  337 (766)
Q Consensus       258 ~~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPdDr~~~~~a~~~~~~~~~~~~~e~Ri~~~  337 (766)
T Consensus        10 ~~Il~~~~d~Iiv~D~~g~I~~~N~aa~~l~g~~~~~~~G~--~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~   85 (348)
T PRK11073         10 GQILNSLINSILLLDDNLAIHYANPAAQQLLAQSSRKLFGT--PLPELLSYFSLNI-ELMQESLQAGQGFTDNEVTLV-I   85 (348)
T ss_pred             HHHHHHHHHHHEEECCCCCEEEECHHHHHHHCCCHHHHCCC--CHHHHHCCCCCCH-HHHHHHHHCCCCCCCCEEEEE-E
T ss_conf             99998660796499897970128399999978598998599--6899846653018-999999973897413239999-8


Q ss_pred             CCCEEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             8988998899999983796069999984461799999999999999
Q gi|254780903|r  338 SGADIWIQVRAQMMRTISGGMNIIGIAMDLTEKYHLEKRYAEADQR  383 (766)
Q Consensus       338 DG~~~Wi~~r~~~i~d~~G~~~~iGi~~DITErK~ae~~l~ese~r  383 (766)
T Consensus        86 ~~~~~~~~~~~~~~~~--~--~~l~~~~di~~~k~l~~e~~~~~~~  127 (348)
T PRK11073         86 DGRSHILSLTAQRLPE--G--MILLEMAPMDNQRRLSQEQLQHAQQ  127 (348)
T ss_pred             CCEEEEEEEEEEECCC--C--EEEEEEEECHHHHHHHHHHHHHHHH
T ss_conf             9969999999998258--6--8999999627999999999999999