HHsearch alignment for GI: 254780903 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=100.00 E-value=0 Score=615.49 Aligned_cols=362 Identities=25% Similarity=0.381 Sum_probs=329.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHHH
Q ss_conf 89999999999999999999999722597459897689789997889977299943305898899976081205899999
Q gi|254780903|r 238 RQAKKNKENDTILLEANICVETALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYDNKKICEIA 317 (766)
Q Consensus 238 ~dit~~r~ae~~l~ese~rl~~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPdDr~~~~~a 317 (766)
T Consensus 138 ~e~~~r~~~q~~l~~~~~llRs~~D~~Pdli~~rd~~g~f~gCNrafe~~~G~~e~eliG~--t~~d~~~~e~a~~~~~~ 215 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGEFSGCNRAMELLTGKSEKQLVGL--TPKDVYSPEAAEKVIET 215 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHCCC--CHHHHCCHHHHHHHHHH
T ss_conf 9999989999999998899998850287515787798765341099998809998998499--83552799889999973
Q ss_pred HHHHHCCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCEE-EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEE
Q ss_conf 99972489848999998869898899889999998379606-99999844617999999999999999999985445515
Q gi|254780903|r 318 RSVTGKHVKQLDQIFHMRHASGADIWIQVRAQMMRTISGGM-NIIGIAMDLTEKYHLEKRYAEADQRLSKAIECTSEALV 396 (766)
Q Consensus 318 ~~~~~~~~~~~~~e~Ri~~~DG~~~Wi~~r~~~i~d~~G~~-~~iGi~~DITErK~ae~~l~ese~rlr~~ie~~~~~i~ 396 (766)
T Consensus 216 D~~v~~~~~~~~~e~w~~~~dG~~~~~e~~k~P~~d~~g~~~G~~g~~rDITerk~aeeaL------------------- 276 (779)
T PRK11091 216 DEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDAL------------------- 276 (779)
T ss_pred HHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEECCHHHHHHHHHH-------------------
T ss_conf 8999864798211134664898667899864013538997887863001601778999999-------------------
Q ss_pred EECCCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCEECCCCC
Q ss_conf 88349969970178988839997894289717881652013789998521124564058999169628742232456997
Q gi|254780903|r 397 LWDKNDRLVMCNANYQKAYGLPDHVLVPGNARSIIQDAQTRPIIEYRTSDPERSQDMSKEIKLADSRWLQINEWCTHDGG 476 (766)
Q Consensus 397 ~~D~~g~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~dg~~~~i~~~~~~dg~ 476 (766)
T Consensus 277 -------------------------------------------------------------------------------- 276 (779)
T PRK11091 277 -------------------------------------------------------------------------------- 276 (779)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred EEEEEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89998862010001122322222221100001788998644457999999999999999988789999999987675222
Q gi|254780903|r 477 TISVGTDITLLKHNQAQLRESKRRLKATINDLSTSRQILERQKTELSIANAKYQVEKERAETANKTKSEFLAKMSHELRT 556 (766)
Q Consensus 477 ~v~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~~ae~an~~k~efla~isHelrt 556 (766)
T Consensus 277 ------------------------------------------------------------E~AsraKS~FLAnMSHEIRT 296 (779)
T PRK11091 277 ------------------------------------------------------------EKASRDKTTFISTISHELRT 296 (779)
T ss_pred ------------------------------------------------------------HHHHHHHHHHHHHHHHHHCH
T ss_conf ------------------------------------------------------------99999999999872687565
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHH
Q ss_conf 47899999999860346889938999999999999999999977767788874198301203316999999999999999
Q gi|254780903|r 557 PLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADLIPIINEGIRLIGSS 636 (766)
Q Consensus 557 PL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~ 636 (766)
T Consensus 297 PLNgIlG~seLL~~t---~L-~~eQre~l~~I~~S~~~Ll~LINDILD~SKIEaGkl~l~~~~fdl~~ll~~v~~~~~~~ 372 (779)
T PRK11091 297 PLNGIVGLSRMLLDT---EL-TAEQEKYLKTIHVSAITLGNIFNDIIDMDKMDRRKLQLDNQPVDFTDFLADLENLSGLQ 372 (779)
T ss_pred HHHHHHHHHHHHHCC---CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHH
T ss_conf 399999999998079---99-99999999999999999999999999999996699678877675999999999999999
Q ss_pred HHHCCCEEEEEECCCCE--EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE-CCEEEEEEEECCCCCCHHHHHHHC
Q ss_conf 98479589998089978--998689999999998865653468988899999997-998999999788978977854304
Q gi|254780903|r 637 AQSKNIKIEKKIPSELF--FNADKRIIKKILFPILSNSIKFTNNNGKMMIRTSKI-GQCVIITIADTGIGIPKSALEKIG 713 (766)
Q Consensus 637 ~~~k~i~l~~~~~~~l~--v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~-~~~v~i~V~D~G~GI~~e~~~~iF 713 (766)
T Consensus 373 A~~Kgl~l~~~~~~~lP~~v~gD~~RLrQIL~NLlsNAIKFT~~-G~V~l~v~~~~~~~l~f~V~DTGiGI~~e~l~~IF 451 (779)
T PRK11091 373 AEQKGLRFDLEPLLPLPHKVITDGTRLRQILWNLISNAVKFTQQ-GQVTVRVRYEDGDMLHFEVEDSGIGIPEDELDKIF 451 (779)
T ss_pred HHHCCCEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCC-CCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHH
T ss_conf 99749889999789998628638999999999999999773899-97799999827988999999579999999999870
Q ss_pred CCEEECCCCCCC-CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC
Q ss_conf 650531467556-7788761689999999962986999979899529999735
Q gi|254780903|r 714 QPFEPLHNQYDQ-SIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMP 765 (766)
Q Consensus 714 ~pF~q~~~~~t~-~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP 765 (766)
T Consensus 452 ~~F~Q~~~s~~~r~~~GTGLGLaI~k~LvelMGG~I~V~S~~G~GStFt~~Lp 504 (779)
T PRK11091 452 AMYYQVKDSHGGKPATGTGIGLAVSRRLAQNMGGDITVTSEEGKGSTFTLTIH 504 (779)
T ss_pred CCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEE
T ss_conf 57560667877767788760799999999984997999955998717999997