HHsearch alignment for GI: 254780903 and conserved domain: PRK11359
>PRK11359 cAMP phosphodiesterase; Provisional.
Probab=99.92 E-value=3.5e-22 Score=178.08 Aligned_cols=236 Identities=13% Similarity=0.152 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCCCHHHHHH-HHHHHH---C
Q ss_conf 999999999999972259745989768978999788997729994330589889997608120589999-999972---4
Q gi|254780903|r 248 TILLEANICVETALSRGRCGLWNFNFDNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYDNKKICEI-ARSVTG---K 323 (766)
Q Consensus 248 ~~l~ese~rl~~al~~a~~GiWd~D~~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPdDr~~~~~-a~~~~~---~ 323 (766)
T Consensus 5 ~~~~~~~~~fr~~lE~s~~GIviiD~~GrIv~~N~aa~~l~GYs~eEllG~--~~~~L~p~d~~~~~~~~l~~~~~~g~~ 82 (799)
T PRK11359 5 DADNAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGN--NIDMLIPRDLRPAHPEYIRHNREGGKA 82 (799)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCC--CHHHHCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 013454799999996188549999699909987189999879299998599--889927853331239999987742655
Q ss_pred CCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCE
Q ss_conf 89848999998869898899889999998379606999998446179999999999999999999854455158834996
Q gi|254780903|r 324 HVKQLDQIFHMRHASGADIWIQVRAQMMRTISGGMNIIGIAMDLTEKYHLEKRYAEADQRLSKAIECTSEALVLWDKNDR 403 (766)
Q Consensus 324 ~~~~~~~e~Ri~~~DG~~~Wi~~r~~~i~d~~G~~~~iGi~~DITErK~ae~~l~ese~rlr~~ie~~~~~i~~~D~~g~ 403 (766)
T Consensus 83 ~~~g~~~E~~~~RKDGs~~~velsvs~i-~~~g~i~~l~ivrDITee~a----~~e~~r~l~~~ld~~~~~I~i~D~~g~ 157 (799)
T PRK11359 83 RVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKVYYLALVRDASVEMA----QKEQTRQLIIAVDHLDRPVIVLDPERH 157 (799)
T ss_pred CCCCCEEEEEEECCCCCEEEEEEEEEEE-CCCCCEEEEEEEEECCHHHH----HHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 4456404899985888899999999776-47992899999997689999----999999999998626872999918987
Q ss_pred EEEECHHHHHHHCCCHHHHCCCCCHHHHCCCHHHHHHHHHHHC---CCCCCCEEEEEEECCCE--EEEECCEEC--CCC-
Q ss_conf 9970178988839997894289717881652013789998521---12456405899916962--874223245--699-
Q gi|254780903|r 404 LVMCNANYQKAYGLPDHVLVPGNARSIIQDAQTRPIIEYRTSD---PERSQDMSKEIKLADSR--WLQINEWCT--HDG- 475 (766)
Q Consensus 404 i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e~~~~dg~--~~~i~~~~~--~dg- 475 (766)
T Consensus 158 i~~vN~a~~el~Gy~~eEl~G~~~~~ll~~pe~~~~~~~~~~~~l~~~~~~~~E~~~~~kdG~~~wv~~s~~pi~d~~g~ 237 (799)
T PRK11359 158 IVQCNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAH 237 (799)
T ss_pred EEEECHHHHHHHCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCC
T ss_conf 89987789998599878974898899834878847999999999864897305899982699799999898899848898
Q ss_pred --CEEEEEEEEEHHHCC
Q ss_conf --789998862010001
Q gi|254780903|r 476 --GTISVGTDITLLKHN 490 (766)
Q Consensus 476 --~~v~v~~~i~~~~~~ 490 (766)
T Consensus 238 ~~~~v~i~~DITErr~~ 254 (799)
T PRK11359 238 LQNLVMTFSDITEERQI 254 (799)
T ss_pred EEEEEEEEEECCHHHHH
T ss_conf 88999999731588899