HHsearch alignment for GI: 254780903 and conserved domain: PRK11360
>PRK11360 sensory histidine kinase AtoS; Provisional.
Probab=100.00 E-value=0 Score=487.12 Aligned_cols=335 Identities=26% Similarity=0.374 Sum_probs=255.2
Q ss_pred HHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHHHCCCHHHHCCCCCHHHHCCCHHHHH-HHHHHHCCCCCCCEE
Q ss_conf 9999999999999854455158834996997017898883999789428971788165201378-999852112456405
Q gi|254780903|r 376 RYAEADQRLSKAIECTSEALVLWDKNDRLVMCNANYQKAYGLPDHVLVPGNARSIIQDAQTRPI-IEYRTSDPERSQDMS 454 (766)
Q Consensus 376 ~l~ese~rlr~~ie~~~~~i~~~D~~g~i~~~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 454 (766)
T Consensus 255 ~L~~~~~~~e~IL~sm~dGVIaiD~~G~I~~~N~~A~~llg~~~~e~ig~-~~~~l~~~~~~~~~~~~~l~~~~~~~~~~ 333 (607)
T PRK11360 255 ALREARTLNELIIENAADGIIAIDRQGDITTMNPAAEVITGYQRHELVGQ-PYSMLFDNTQFYSPVLDTLEHGTEHVALE 333 (607)
T ss_pred HHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECHHHHHHHCCCHHHHCCC-CHHHHCCCHHHHHHHHHHHHCCCCCCCEE
T ss_conf 99999998999986104669999799949998389999858797898596-79995795767799999985377421248
Q ss_pred EEEEECCCE-EEEECCEECCC--C---CEEEEEEEEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899916962-87422324569--9---78999886201000112232222222110000178899864445799999999
Q gi|254780903|r 455 KEIKLADSR-WLQINEWCTHD--G---GTISVGTDITLLKHNQAQLRESKRRLKATINDLSTSRQILERQKTELSIANAK 528 (766)
Q Consensus 455 ~e~~~~dg~-~~~i~~~~~~d--g---~~v~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 528 (766)
T Consensus 334 ~~~~~~~~~~~l~~~~s~~~~~~g~~~G~v~~~~DiTe~~~l-----------------------------------e~~ 378 (607)
T PRK11360 334 ISFPGRDRTIELSVTTSRLHDTHGEMIGAVVIFSDLTARKRL-----------------------------------QRR 378 (607)
T ss_pred EEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHHH-----------------------------------HHH
T ss_conf 996058834999999853576898588999999957789999-----------------------------------999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999887899999999876752224789999999986034688993899999999999999999997776778887
Q gi|254780903|r 529 YQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKI 608 (766)
Q Consensus 529 l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~sri 608 (766)
T Consensus 379 l~----~~er-laalGe~~A~vaHElRnPLt~I~g~~elL~~~~~----~~~~~~~l~~i~~e~~Rl~~li~~lL~~sr~ 449 (607)
T PRK11360 379 MA----RAER-LAALGELMAGVAHEIRNPLTAIRGYVQILRQQTS----DPIHQEYLSVVLREVDSLNKVIQQLLEFSRP 449 (607)
T ss_pred HH----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99----9999-9999999999899871549999999999866899----8799999999999999999999999985277
Q ss_pred HCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCE-EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 419830120331699999999999999998479589998089978-9986899999999988656534689888999999
Q gi|254780903|r 609 ETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSELF-FNADKRIIKKILFPILSNSIKFTNNNGKMMIRTS 687 (766)
Q Consensus 609 eag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~-v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~ 687 (766)
T Consensus 450 ~~~----~~~~v~l~~l~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~D~~~l~qvl~NLi~NAi~a~~~~g~I~i~~~ 525 (607)
T PRK11360 450 RHS----QWQQVSLNALVEEVLVLVQTAGVQARVDFITELDNELPPINADRELLKQVLLNILINAVQAISARGKIRIRTW 525 (607)
T ss_pred CCC----CCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
T ss_conf 888----8847869999999999999988867968999818988769988899999999999996286289967999999
Q ss_pred EE-CCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECC
Q ss_conf 97-9989999997889789778543046505314675567788761689999999962986999979899529999735
Q gi|254780903|r 688 KI-GQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMP 765 (766)
Q Consensus 688 ~~-~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP 765 (766)
T Consensus 526 ~~~~~~v~i~V~D~G~GI~~e~~~~IFepF~------ttk~~GtGLGLaI~k~Ive~hgG~I~v~S~~g~GT~F~i~LP 598 (607)
T PRK11360 526 QYSDSQQAISIEDNGCGIDLELLKKIFDPFF------TTKASGTGLGLALSQRIINAHQGDIRVASLPGYGTTFTLILP 598 (607)
T ss_pred EECCCEEEEEEEECCCCCCHHHHHHHCCCCC------CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEE
T ss_conf 9369879999998676869899964558975------489998133799999999988998999966999869999980