HHsearch alignment for GI: 254780903 and conserved domain: PRK13557
>PRK13557 histidine kinase; Provisional.
Probab=100.00 E-value=0 Score=548.00 Aligned_cols=345 Identities=18% Similarity=0.319 Sum_probs=300.4
Q ss_pred HHHHHHHHHHHCCCCCEEEEEC---CCCEEEECHHHHHHCCCCHHHCCCCHHHHHHHHCCC-CHHHHHHHHHHHHCCCCE
Q ss_conf 9999999997225974598976---897899978899772999433058988999760812-058999999997248984
Q gi|254780903|r 252 EANICVETALSRGRCGLWNFNF---DNKKFHLSRSMYEIMGIPYENKTLSFRAIARLIHYD-NKKICEIARSVTGKHVKQ 327 (766)
Q Consensus 252 ese~rl~~al~~a~~GiWd~D~---~~~~i~ws~~~~~llG~~~~e~~~s~~~~~~~vHPd-Dr~~~~~a~~~~~~~~~~ 327 (766)
T Consensus 25 ~~~~~~~~~v~~~~~~~~~~d~~~~Dg~I~~vN~af~~~tGYs~eEviGk~--~~~L~~p~~~~~~~~~~~~~i~-~~~~ 101 (538)
T PRK13557 25 HRSDIFFAAVETTRMPMIVTDPRQPDNPIVFANRAFLEMTGYAAEEIIGNN--CRFLQGPETDRATVADVRDAIA-ERRE 101 (538)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECHHHHHHHCCCHHHHCCCC--HHHCCCCCCCHHHHHHHHHHHH-CCCC
T ss_conf 889999999960797389935899998799983999998795999986999--8770898899999999999997-5993
Q ss_pred EEEEEEEECCCCCEEEEEEEEEEEEECCCEE-EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEE
Q ss_conf 8999998869898899889999998379606-999998446179999999999999999999854455158834996997
Q gi|254780903|r 328 LDQIFHMRHASGADIWIQVRAQMMRTISGGM-NIIGIAMDLTEKYHLEKRYAEADQRLSKAIECTSEALVLWDKNDRLVM 406 (766)
Q Consensus 328 ~~~e~Ri~~~DG~~~Wi~~r~~~i~d~~G~~-~~iGi~~DITErK~ae~~l~ese~rlr~~ie~~~~~i~~~D~~g~i~~ 406 (766)
T Consensus 102 ~~~E~~n~rKDG~~~w~~~~i~pv~d~~G~~~~~~~i~~DITerk~~E~~L~qaqk------------------------ 157 (538)
T PRK13557 102 IATEILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQK------------------------ 157 (538)
T ss_pred EEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHH------------------------
T ss_conf 68799998799999999989999998999999999988344499999999999999------------------------
Q ss_pred ECHHHHHHHCCCHHHHCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCEECCCCCEEEEEEEEEH
Q ss_conf 01789888399978942897178816520137899985211245640589991696287422324569978999886201
Q gi|254780903|r 407 CNANYQKAYGLPDHVLVPGNARSIIQDAQTRPIIEYRTSDPERSQDMSKEIKLADSRWLQINEWCTHDGGTISVGTDITL 486 (766)
Q Consensus 407 ~N~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~dg~~~~i~~~~~~dg~~v~v~~~i~~ 486 (766)
T Consensus 158 -------------------------------------------------------------------------------- 157 (538)
T PRK13557 158 -------------------------------------------------------------------------------- 157 (538)
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00011223222222211000017889986444579999999999999999887899999999876752224789999999
Q gi|254780903|r 487 LKHNQAQLRESKRRLKATINDLSTSRQILERQKTELSIANAKYQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSE 566 (766)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~e 566 (766)
T Consensus 158 -----------------------------------------------------lealg~~~a~isHEirnPL~~I~G~~~ 184 (538)
T PRK13557 158 -----------------------------------------------------MEALGQLTGGIAHDFNNLLQVMSGYLD 184 (538)
T ss_pred -----------------------------------------------------HHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_conf -----------------------------------------------------999999998878876269999999999
Q ss_pred HHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 986034688-9938999999999999999999977767788874198301203316999999999999999984795899
Q gi|254780903|r 567 VIKKEIFGE-LGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIE 645 (766)
Q Consensus 567 ll~~~~~~~-~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~ 645 (766)
T Consensus 185 lL~~~~~~~~~~~~~~~~~l~~i~~~~~r~~~Li~~lL~fsr----~~~l~~~~~~l~~lv~~~~~l~~~~-~~~~i~l~ 259 (538)
T PRK13557 185 VLQMALSKPDADRERIARSVEHIRAAAERAATLTQQLLAFAR----KQKLDGRVVNLNGLVSGMGEMAERT-LGDAVTIE 259 (538)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCEEECHHHHHHHHHHHHHHH-HCCCEEEE
T ss_conf 998640168889999999999999999999999999999758----2768771772999999999999998-52991999
Q ss_pred EEECCCCE-EEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE---------------CCEEEEEEEECCCCCCHHHH
Q ss_conf 98089978-998689999999998865653468988899999997---------------99899999978897897785
Q gi|254780903|r 646 KKIPSELF-FNADKRIIKKILFPILSNSIKFTNNNGKMMIRTSKI---------------GQCVIITIADTGIGIPKSAL 709 (766)
Q Consensus 646 ~~~~~~l~-v~~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~---------------~~~v~i~V~D~G~GI~~e~~ 709 (766)
T Consensus 260 ~~~~~~l~~~~~D~~~l~qvl~NLl~NA~~a~~~gg~i~i~~~~~~~~~~~~~~~~~~~~g~~v~i~V~DtG~GI~~e~~ 339 (538)
T PRK13557 260 TDLAPDLWNCRIDPTQAEVALLNVLINARDAMPEGGRVTVRTENVEITEHDLAMYHQLPPGRYVSIAVTDTGSGMPPEIL 339 (538)
T ss_pred EEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
T ss_conf 98079887087558999999999898799865789759999987641542100124578887899999986898898999
Q ss_pred HHHCCCEEECCCCCCCCCC-CCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 4304650531467556778-87616899999999629869999798995299997359
Q gi|254780903|r 710 EKIGQPFEPLHNQYDQSIG-GFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 710 ~~iF~pF~q~~~~~t~~~~-GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 340 ~rIFepFf-----ttk~~~~GtGLGLaIv~~iV~~~gG~I~v~S~~G~GttF~v~lP~ 392 (538)
T PRK13557 340 ARVMEPFF-----TTKEEGKGTGLGLSMVYGFAKQSGGAVRIYSEVGEGTTVRLYFPA 392 (538)
T ss_pred HHHHCCCE-----EECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 97725010-----422457877724999999999879959999328987799999867