HHsearch alignment for GI: 254780903 and conserved domain: PRK13837

>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=100.00  E-value=0  Score=418.08  Aligned_cols=233  Identities=22%  Similarity=0.381  Sum_probs=203.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             64445799999999999999998878999999998767522247899999999860346889938999999999999999
Q gi|254780903|r  515 LERQKTELSIANAKYQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQH  594 (766)
Q Consensus       515 ~~~~~~~L~~~~~~l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~  594 (766)
T Consensus       430 ~~r~etER~~LE~qL~qA-----QKmEAiG~LAgGIAHDFNNiLt~I~G~aeLa~~~l~~---~~~~~~~L~~I~~aa~R  501 (831)
T PRK13837        430 RRRLETERDALERRLEHA-----RRLEAVGTLASGIAHNFNNILGAILGYAEMALNKLRR---HSRARRHIDEIISSGDR  501 (831)
T ss_pred             HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHH
T ss_conf             988799999999999999-----9999999999899998700899999999998620699---84778999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC-EEEECHHHHHHHHHHHHHHHH
Q ss_conf             9999777677888741983012033169999999999999999847958999808997-899868999999999886565
Q gi|254780903|r  595 LLNMINNILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSEL-FFNADKRIIKKILFPILSNSI  673 (766)
Q Consensus       595 l~~lI~diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l-~v~~D~~~l~QVl~NLi~NAi  673 (766)
T Consensus       502 a~~Lv~qLL~FSR----~~~~~~~~vdl~~lv~e~~~llr~~l~-~~I~l~~~~~~~~~~V~aD~~QL~QVllNL~~NA~  576 (831)
T PRK13837        502 ARLIIDQILTFGR----KGERRTKPFSLSELVTEIAPLLRVSLP-PTVELDFDFDQEPAVVEGNPAQLQQVILNLCKNAA  576 (831)
T ss_pred             HHHHHHHHHHHHC----CCCCCCCEECHHHHHHHHHHHHHHHCC-CCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf             9999999999858----999977177499999999999998758-98699997189885388879999999999999999


Q ss_pred             HCCCCCCEEEEEEEEE---------------CCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf             3468988899999997---------------9989999997889789778543046505314675567788761689999
Q gi|254780903|r  674 KFTNNNGKMMIRTSKI---------------GQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISD  738 (766)
Q Consensus       674 k~t~~~g~I~i~~~~~---------------~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k  738 (766)
T Consensus       577 dAM~~gG~l~I~~~~~~~~~~~~~~~~~~~~G~yv~L~VsDtG~GI~~e~l~RIFEPFF-----TTK-~~GTGLGLAvV~  650 (831)
T PRK13837        577 QAMDENGRVDIRLSRVDLRKPKVLAHGTAPPGRYVLLRVSDTGRGIDEAVLPHIFEPFF-----TTR-ARGTGLGLATVH  650 (831)
T ss_pred             HHCCCCCEEEEEEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCC-----CCC-CCCCCCCHHHHH
T ss_conf             97679986999985553363232115778998989999986799989899966048986-----788-998874699999


Q ss_pred             HHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf             9999629869999798995299997359
Q gi|254780903|r  739 ALTNLHGGRLKIISQEGKGTIVTICMPQ  766 (766)
Q Consensus       739 ~iVe~hgG~I~v~S~~g~Gttf~i~LP~  766 (766)
T Consensus       651 gIV~~hgG~I~V~S~pG~GTtF~v~LP~  678 (831)
T PRK13837        651 GIVSAHAGYIDVQSTVGRGTRFDVYLPP  678 (831)
T ss_pred             HHHHHCCCEEEEECCCCCCEEEEEEEEC
T ss_conf             9999869869997269997189998317