HHsearch alignment for GI: 254780903 and conserved domain: PRK13837
>PRK13837 two-component VirA-like sensor kinase; Provisional.
Probab=100.00 E-value=0 Score=418.08 Aligned_cols=233 Identities=22% Similarity=0.381 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 64445799999999999999998878999999998767522247899999999860346889938999999999999999
Q gi|254780903|r 515 LERQKTELSIANAKYQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQH 594 (766)
Q Consensus 515 ~~~~~~~L~~~~~~l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~ 594 (766)
T Consensus 430 ~~r~etER~~LE~qL~qA-----QKmEAiG~LAgGIAHDFNNiLt~I~G~aeLa~~~l~~---~~~~~~~L~~I~~aa~R 501 (831)
T PRK13837 430 RRRLETERDALERRLEHA-----RRLEAVGTLASGIAHNFNNILGAILGYAEMALNKLRR---HSRARRHIDEIISSGDR 501 (831)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CCHHHHHHHHHHHHHHH
T ss_conf 988799999999999999-----9999999999899998700899999999998620699---84778999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC-EEEECHHHHHHHHHHHHHHHH
Q ss_conf 9999777677888741983012033169999999999999999847958999808997-899868999999999886565
Q gi|254780903|r 595 LLNMINNILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSEL-FFNADKRIIKKILFPILSNSI 673 (766)
Q Consensus 595 l~~lI~diLd~srieag~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l-~v~~D~~~l~QVl~NLi~NAi 673 (766)
T Consensus 502 a~~Lv~qLL~FSR----~~~~~~~~vdl~~lv~e~~~llr~~l~-~~I~l~~~~~~~~~~V~aD~~QL~QVllNL~~NA~ 576 (831)
T PRK13837 502 ARLIIDQILTFGR----KGERRTKPFSLSELVTEIAPLLRVSLP-PTVELDFDFDQEPAVVEGNPAQLQQVILNLCKNAA 576 (831)
T ss_pred HHHHHHHHHHHHC----CCCCCCCEECHHHHHHHHHHHHHHHCC-CCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHH
T ss_conf 9999999999858----999977177499999999999998758-98699997189885388879999999999999999
Q ss_pred HCCCCCCEEEEEEEEE---------------CCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHH
Q ss_conf 3468988899999997---------------9989999997889789778543046505314675567788761689999
Q gi|254780903|r 674 KFTNNNGKMMIRTSKI---------------GQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISD 738 (766)
Q Consensus 674 k~t~~~g~I~i~~~~~---------------~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k 738 (766)
T Consensus 577 dAM~~gG~l~I~~~~~~~~~~~~~~~~~~~~G~yv~L~VsDtG~GI~~e~l~RIFEPFF-----TTK-~~GTGLGLAvV~ 650 (831)
T PRK13837 577 QAMDENGRVDIRLSRVDLRKPKVLAHGTAPPGRYVLLRVSDTGRGIDEAVLPHIFEPFF-----TTR-ARGTGLGLATVH 650 (831)
T ss_pred HHCCCCCEEEEEEEEEECCCHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCC-----CCC-CCCCCCCHHHHH
T ss_conf 97679986999985553363232115778998989999986799989899966048986-----788-998874699999
Q ss_pred HHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 9999629869999798995299997359
Q gi|254780903|r 739 ALTNLHGGRLKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 739 ~iVe~hgG~I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 651 gIV~~hgG~I~V~S~pG~GTtF~v~LP~ 678 (831)
T PRK13837 651 GIVSAHAGYIDVQSTVGRGTRFDVYLPP 678 (831)
T ss_pred HHHHHCCCEEEEECCCCCCEEEEEEEEC
T ss_conf 9999869869997269997189998317