HHsearch alignment for GI: 254780903 and conserved domain: TIGR00585
>TIGR00585 mutl DNA mismatch repair protein MutL; InterPro: IPR014763 This entry represents DNA mismatch repair proteins, such as MutL. The dimeric MutL protein has a key function in communicating mismatch recognition by MutS to downstream repair processes. Mismatch repair contributes to the overall fidelity of DNA replication by targeting mispaired bases that arise through replication errors during homologous recombination and as a result of DNA damage. It involves the correction of mismatched base pairs that have been missed by the proofreading element of the DNA polymerase complex ..
Probab=97.81 E-value=7.8e-05 Score=52.83 Aligned_cols=56 Identities=21% Similarity=0.295 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCEEE
Q ss_conf 99999999886565346898889999999799899999978897897785430465053
Q gi|254780903|r 660 IIKKILFPILSNSIKFTNNNGKMMIRTSKIGQCVIITIADTGIGIPKSALEKIGQPFEP 718 (766)
Q Consensus 660 ~l~QVl~NLi~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q 718 (766)
T Consensus 22 ~p~~vVKELvENSLDAG--At~I~v~~~~gG~-~~I~V~DNG~Gi~~~d~~~~~~~haT 77 (367)
T TIGR00585 22 RPASVVKELVENSLDAG--ATKIEVEIEEGGL-KLIEVSDNGSGIDKEDLELACERHAT 77 (367)
T ss_pred HHHHHHHHHHHHHHCCC--CCEEEEEEEECCE-EEEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 27999999887312148--8589999962653-58999977856777779986123577