HHsearch alignment for GI: 254780904 and conserved domain: pfam04407

>pfam04407 DUF531 Protein of unknown function (DUF531). Family of hypothetical archaeal proteins.
Probab=96.57  E-value=0.036  Score=33.44  Aligned_cols=146  Identities=17%  Similarity=0.179  Sum_probs=80.8

Q ss_pred             CEEEEECCCCCC-----HHHHHHHH---HHHCCCCEEEECC-CCCCCCCHHHHHHHHHC----C-CCC----CCHHC-CC
Q ss_conf             689994288854-----79999999---9971998049808-88899999999985310----1-344----42001-37
Q gi|254780904|r   15 PVIILVDPQLGE-----NIGMVARA---MWNFNLTQLRLVN-PRDGWPSEKARSSSANA----D-CVI----DSVRV-FS   75 (268)
Q Consensus        15 ~~vVLv~p~~p~-----NiGaiaRa---~~~fG~~~L~lv~-P~~~~~~~~a~~~a~~a----~-~~~----~~~~~-~~   75 (268)
T Consensus         2 lTl~LyNtYd~~k~~e~H~RaIARAapic~Af~~-~LAL~~FP~~~~~~el~~~v~~~TtIG~~G~yl~~L~~~nr~~i~   80 (174)
T pfam04407         2 LTLGLYNTYDKKKVHEAHYRAIARAAPICYAFGF-HLALFGFPFDMTPKELAEYVADKTTIGESGKYLLELAESNKLHVI   80 (174)
T ss_pred             EEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEE
T ss_conf             3799984468775660899999846047664178-779877988778799999976427327767999999874967898


Q ss_pred             CHH--HHHHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf             789--984125531012011223430341242035666553115881699994588842431000123222047678734
Q gi|254780904|r   76 NLK--EAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFP  153 (268)
Q Consensus        76 ~~~--~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~  153 (268)
T Consensus        81 d~p~k~fp~qfG~~IaTT~kPd~--~K~~----~p~eia~~~l~~~s~~lliGLGr~GLPk~i~~~a~yHldiT--gkgI  152 (174)
T pfam04407        81 DFPKKGFPPQFGEVVATTSKPDE--KKAI----TPEDVAREALRNKSFLLLIGLGRHGLPKELFESARYHLDIT--GKGV  152 (174)
T ss_pred             ECCCCCCCHHCCCEEEECCCCCC--CCCC----CHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCHHHEEEC--CCCE
T ss_conf             36300383320965887789984--5578----97999998742886799994078888699986431106612--7831


Q ss_pred             CHHHHHHHHHHHHHHH
Q ss_conf             1016889999999999
Q gi|254780904|r  154 SLNISQAVLLMVWECM  169 (268)
Q Consensus       154 SLNLS~AvaIvlYEl~  169 (268)
T Consensus       153 sLETcTAiGaI~a~i~  168 (174)
T pfam04407       153 SLETCTAIGAIPARIY  168 (174)
T ss_pred             EEEECHHHHHHHHHHH
T ss_conf             3662045616999999