HHsearch alignment for GI: 254780904 and conserved domain: pfam09895

>pfam09895 DUF2122 RecB-family nuclease (DUF2122). This domain, found in various hypothetical archaeal proteins, has no known function.

Probab=94.68  E-value=0.097  Score=30.72  Aligned_cols=97  Identities=16%  Similarity=0.114  Sum_probs=57.3

Q ss_pred             HHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf             99999853101344420013778998412553101201122343034124203566655311588169999458884243
Q gi|254780904|r   55 EKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTN  134 (268)
Q Consensus        55 ~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~  134 (268)
T Consensus         9 Pe~~KlA---~K~gk~llvl~dl~DAiEvL~P~~v~~i~~~~~~-----------~~~~~l~~~~rvllvf~G~e~gfsk   74 (105)
T pfam09895         9 PEVFKLA---LKLGKSLLVLPDLKDAIELLKPDVVYLLSRAAEG-----------IKKEVLKVEGRVLLVFSGAEPGFSK   74 (105)
T ss_pred             HHHHHHH---HHCCCCEEEECCHHHHHHHHCCCEEEEECCCCCC-----------CCHHHHHCCCCEEEEECCCCCCCCH
T ss_conf             4999999---9819958983877889987298779997576656-----------2034553058389998189889796


Q ss_pred             CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             1000123222047678734101688999999999
Q gi|254780904|r  135 EEIALSNAIISFPVNPLFPSLNISQAVLLMVWEC  168 (268)
Q Consensus       135 eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl  168 (268)
T Consensus        75 ~El~~g~~v~~~~v~~~iG~i---g~~Ai~Ly~l  105 (105)
T pfam09895        75 IELELGEAVYIKGVESDVGPI---GALAIILYLL  105 (105)
T ss_pred             HHHCCCCEEEEECCCCCCCCH---HHHHHHHHHC
T ss_conf             561488447860365566628---8999999509