HHsearch alignment of GI: 254780904 and MMDB domain: 1vlv_A_165-294
>1vlv_A (A:165-294) Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima}
Probab=90.90 E-value=1.1 Score=23.70 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=58.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547999999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|.++.--+..=+-|.++++.-||+ ++.++.|....+.+.....+.. +...-....++.++++++++.+.+...+
T Consensus 2 ~glkia~vGD~~~rv~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDviytd~ 80 (130)
T 1vlv_A 2 KGVKVVFMGDTRNNVATSLMIACAKMGM-NFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 80 (130)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHTTC-EEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEECCCCCEEEEHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 4455146415555064137889987698-499996113235423454454420012355334359999983466455446
Q ss_pred CCC
Q ss_conf 112
Q gi|254780904|r 92 ARN 94 (268)
Q Consensus 92 ~~~ 94 (268)
-..
T Consensus 81 w~~ 83 (130)
T 1vlv_A 81 WAS 83 (130)
T ss_dssp CC-
T ss_pred HHH
T ss_conf 654