HHsearch alignment of GI: 254780904 and MMDB domain: 1x7o_A_119-287
>1x7o_A (A:119-287) Avirb, rRNA methyltransferase; SPOU, C-terminal knot, seMet; 2.37A {Streptomyces viridochromogenes} PDB: 1x7p_A*
Probab=100.00 E-value=1.4e-34 Score=237.03 Aligned_cols=165 Identities=16% Similarity=0.095 Sum_probs=132.2
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCC
Q ss_conf 32134896899942888547999999999719980498088889999999998531013444200137789984125531
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFI 87 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~ 87 (268)
+......+.|||++|++|+|||+|+|+|++||++.+++++|+++++++++.+.++|+.+.+. ...+.+++++...+...
T Consensus 2 l~~~~~~~~vvl~~~~~p~NiGai~Rta~afG~~~i~~~~~~~~~~~~~~~r~s~g~~~~~~-~~~~~~~~~~~~~~~~~ 80 (169)
T 1x7o_A 2 IPVREDFLGVLFDRPTSPGNIGSIIRSADALGAHGLIVAGHAADVYDPKSVRSSTGSLFSLP-AVRVPSPGEVXDWVEAR 80 (169)
T ss_dssp SCCCTTCEEEEEESCSCHHHHHHHHHHHHHTTCCEEEEESSSSCTTSHHHHHHTTTGGGTSC-EEEESSHHHHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCHHHHHCC-CCCCCCCCCCCCCCHHH
T ss_conf 12466728999834121665998877887354676986313333331002102200211101-22334110000000134
Q ss_pred EEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 01201122343034124203566655311588169999458884243100012322204767873410168899999999
Q gi|254780904|r 88 YATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWE 167 (268)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYE 167 (268)
... .....................+..+++||||+|++||++++++.||.+++|||.+.++|||||+|++|+|||
T Consensus 81 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~lvfG~E~~Gl~~~~l~~~d~~v~IP~~g~~~SLNvs~A~aI~lye 155 (169)
T 1x7o_A 81 RAA-----GTPIVLVGTDEHGDCDVFDFDFTQPTLLLIGNETAGLSNAWRTLCDYTVSIPXAGSASSLNAANAATAILYE 155 (169)
T ss_dssp HHH-----TCCCEEEEECTTCSEEGGGSCTTSCEEEEECBTTTBSCHHHHHHCSEEEECCCSSSSCCCCHHHHHHHHHHH
T ss_pred HHC-----CCCEEEECCHHCCCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHH
T ss_conf 433-----775687411000343211120268619998888878899999858989998899999713199999999999
Q ss_pred HHHHHCCCCCC
Q ss_conf 99962136654
Q gi|254780904|r 168 CMENSIVSSEK 178 (268)
Q Consensus 168 l~r~~~~~~~~ 178 (268)
++|+.......
T Consensus 156 ~~rq~~~~~~~ 166 (169)
T 1x7o_A 156 AVRQRISGRTA 166 (169)
T ss_dssp HHHHHSSCCCC
T ss_pred HHHHHHCCCCC
T ss_conf 99878628999