HHsearch alignment of GI: 254780904 and MMDB domain: 1zjr_A_24-180
>1zjr_A (A:24-180) TRNA (guanosine-2'-O-)-methyltransferase; methylase, RNA modifying enzyme, topological knot; 1.85A {Aquifex aeolicus}
Probab=99.97 E-value=7.7e-32 Score=219.72 Aligned_cols=152 Identities=13% Similarity=0.103 Sum_probs=119.5
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 96899942888547999999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 14 GPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
..+|||++|++|+|+|+|+|+|++||++.+++++|++. +++++.+.|+|+.+.+....+....+.........
T Consensus 2 ~~~ivl~~~~~p~NiG~i~Rta~afG~~~i~~~~~~~~-~~~~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (157)
T 1zjr_A 2 DLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEGK-KAKINEGITQGSHKWVFIEKVDNPVQKLLEFKNRG------ 74 (157)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHTEEEEEEECSSTT-CCCCCHHHHTTGGGSSEEEECSCHHHHHHHHHHTT------
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCC-CCHHHHHHHCCCCCCCCEEEEEECHHHCCCCCCCC------
T ss_conf 98999958988167899999998659978998589988-50667987433443464689841033201212221------
Q ss_pred CCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 22343034124203566655311588169999458884243100012322204767873410168899999999999621
Q gi|254780904|r 94 NRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSI 173 (268)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r~~~ 173 (268)
.....................++++||||+|+.|||+++++.||..++|||.+.++|||||+|++|+|||++|+..
T Consensus 75 ----~~ii~~~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~~~~~~~d~~v~IP~~g~~~SLNva~A~aIvl~e~~rq~~ 150 (157)
T 1zjr_A 75 ----FQIVATWLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQRE 150 (157)
T ss_dssp ----CEEEEEBCSTTSEEGGGSCTTSSEEEEEECBTTBSCHHHHTTCSEEEECCCCSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ----EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
T ss_conf ----0122101233322220135776259996684343789999558869998899999746699999999999998687
Q ss_pred CCC
Q ss_conf 366
Q gi|254780904|r 174 VSS 176 (268)
Q Consensus 174 ~~~ 176 (268)
...
T Consensus 151 ~~~ 153 (157)
T 1zjr_A 151 EKG 153 (157)
T ss_dssp HTT
T ss_pred HCC
T ss_conf 448