HHsearch alignment of GI: 254780904 and MMDB domain: 2i6d_A_99-257
>2i6d_A (A:99-257) RNA methyltransferase, TRMH family; stuctural genomics, knot, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.85A {Porphyromonas gingivalis W83}
Probab=100.00 E-value=1.6e-32 Score=224.07 Aligned_cols=152 Identities=17% Similarity=0.123 Sum_probs=118.7
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 48968999428885479999999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 12 AKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 12 ~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
...+.|||++|++|+|||+|+|+|++||++.+++++|+++++++++.+.|.|+.+.+....+ +++++++..+.
T Consensus 3 ~~~~~vvl~~~~~~~NiG~i~Rt~~a~G~~~i~l~~~~~~~~~~~~~r~a~ga~~~i~~~~~-~~~~~~~~~~~------ 75 (159)
T 2i6d_A 3 VEGLTLLLDGVQDPGNVGTILRTADWFGIRHVWLGTGSADVFSPKVVQASXGALARVQPTPL-KNTVDTLAYFR------ 75 (159)
T ss_dssp CCSEEEEEESCCCHHHHHHHHHHHHHHTCCEEEECTTCCCTTSHHHHHTSTTGGGTCEEEEC-SCHHHHHHHHH------
T ss_pred CCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHH------
T ss_conf 67769998500355559999844650111157774023333443555421111101022233-32100223431------
Q ss_pred CCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCC-----CCCCCHHHHHHHHHHHH
Q ss_conf 1122343034124203566655311588169999458884243100012322204767-----87341016889999999
Q gi|254780904|r 92 ARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVN-----PLFPSLNISQAVLLMVW 166 (268)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~-----~~~~SLNLS~AvaIvlY 166 (268)
.........................++++||||+|++||++++++.||..++||+. +..+|||||+|++|+||
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~l~~~d~~v~IP~~~~~m~g~~~SLNva~A~~I~ly 153 (159)
T 2i6d_A 76 --RQGIPVYGAFLDGQSLYEAPLPNFTEPAILVLGSEGRGISPEVAAEITDRLTIPASGLSVKGHTESLNVAIATAILCS 153 (159)
T ss_dssp --HTTCCEEEEEEEEEETTTSCCCCTTSCEEEEEEBTTTBSCHHHHTTCSEEEECCCCSSCC----CCCCHHHHHHHHHH
T ss_pred --CCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHH
T ss_conf --157543222234542100222057763699981566678999998589789989887788999872139999999999
Q ss_pred HHHHHH
Q ss_conf 999962
Q gi|254780904|r 167 ECMENS 172 (268)
Q Consensus 167 El~r~~ 172 (268)
|++||.
T Consensus 154 e~~rq~ 159 (159)
T 2i6d_A 154 EWRRRS 159 (159)
T ss_dssp HHHHTC
T ss_pred HHHHCC
T ss_conf 998478