Query gi|254780904|ref|YP_003065317.1| tRNA/rRNA methyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 268
No_of_seqs 177 out of 3436
Neff 7.7
Searched_HMMs 33803
Date Wed Jun 1 18:56:12 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780904.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >3ic6_A Putative methylase fam 100.0 1.8E-35 5.5E-40 242.5 12.5 172 6-177 9-199 (201)
2 >3gyq_A RRNA (adenosine-2'-O-) 100.0 1.4E-34 4.2E-39 236.9 13.5 156 11-176 4-159 (160)
3 >1x7o_A Avirb, rRNA methyltran 100.0 1.4E-34 4.1E-39 237.0 12.9 165 8-178 2-166 (169)
4 >3kty_A Probable methyltransfe 100.0 3.8E-34 1.1E-38 234.3 12.6 166 7-172 3-172 (173)
5 >1gz0_A Hypothetical tRNA/RRNA 100.0 4.8E-34 1.4E-38 233.6 12.5 157 5-172 7-163 (164)
6 >1ipa_A RRMH, RNA 2'-O-ribose 100.0 7.8E-33 2.3E-37 226.0 13.3 156 8-178 2-159 (166)
7 >2i6d_A RNA methyltransferase, 100.0 1.6E-32 4.7E-37 224.1 11.9 152 12-172 3-159 (159)
8 >1mxi_A YIBK, hypothetical tRN 100.0 2.3E-32 6.9E-37 223.0 12.6 151 15-178 2-154 (160)
9 >3ilk_A Uncharacterized tRNA/R 100.0 2.1E-32 6.2E-37 223.3 12.4 162 10-176 3-164 (174)
10 >2ha8_A TAR (HIV-1) RNA loop b 100.0 4.1E-32 1.2E-36 221.5 11.4 158 9-176 21-179 (184)
11 >3e5y_A TRMH family RNA methyl 100.0 5.1E-32 1.5E-36 220.9 10.9 155 11-176 2-158 (160)
12 >1v2x_A TRNA (GM18) methyltran 100.0 1.6E-32 4.7E-37 224.1 6.9 149 14-176 2-152 (156)
13 >1zjr_A TRNA (guanosine-2'-O-) 100.0 7.7E-32 2.3E-36 219.7 9.4 152 14-176 2-153 (157)
14 >3dcm_X AdoMet, uncharacterize 100.0 6.1E-33 1.8E-37 226.7 3.2 166 10-175 13-190 (192)
15 >3ilk_A Uncharacterized tRNA/R 99.5 2.6E-13 7.6E-18 103.2 8.2 68 185-256 2-69 (70)
16 >1k3r_A Conserved protein MT00 94.4 0.33 9.6E-06 27.0 8.1 143 18-170 14-183 (192)
17 >1z85_A Hypothetical protein T 93.3 0.54 1.6E-05 25.6 7.6 135 15-169 4-146 (152)
18 >1duv_G Octase-1, ornithine tr 92.3 0.64 1.9E-05 25.1 6.9 79 13-92 2-81 (126)
19 >1dxh_A Ornithine carbamoyltra 91.7 0.74 2.2E-05 24.8 6.7 80 13-93 2-82 (122)
20 >1vlv_A Otcase, ornithine carb 90.9 1.1 3.2E-05 23.7 7.3 81 13-94 2-83 (130)
21 >1v6z_A Hypothetical protein T 89.6 1.4 4.1E-05 23.0 8.7 140 15-169 5-156 (161)
22 >2egv_A UPF0088 protein AQ_165 89.6 1.4 4.2E-05 23.0 9.0 141 15-168 6-159 (162)
23 >2w37_A Ornithine carbamoyltra 87.8 1.8 5.5E-05 22.3 7.1 79 13-92 2-81 (159)
24 >1pvv_A Otcase, ornithine carb 87.5 1.6 4.6E-05 22.7 5.6 78 14-94 3-82 (128)
25 >2i6u_A Otcase, ornithine carb 86.7 2.1 6.3E-05 21.9 8.0 80 13-93 2-82 (129)
26 >3gd5_A Otcase, ornithine carb 86.5 1.9 5.6E-05 22.2 5.6 76 14-92 3-80 (128)
27 >1ml4_A Aspartate transcarbamo 85.7 2.4 7.1E-05 21.5 6.2 76 13-92 2-78 (124)
28 >2rgw_A Aspartate carbamoyltra 84.7 1.9 5.6E-05 22.2 4.9 76 13-92 3-80 (134)
29 >1e8c_A UDP-N-acetylmuramoylal 84.6 1.8 5.3E-05 22.4 4.7 119 8-131 7-132 (161)
30 >1pg5_A Aspartate carbamoyltra 81.0 2.5 7.5E-05 21.4 4.3 75 13-93 3-78 (123)
31 >1oth_A Protein (ornithine tra 80.8 2 6E-05 22.0 3.8 77 14-93 3-81 (128)
32 >3csu_A Protein (aspartate car 80.1 4 0.00012 20.2 6.6 76 13-92 2-79 (134)
33 >3grf_A Ornithine carbamoyltra 78.9 4.3 0.00013 19.9 7.1 79 13-92 3-86 (135)
34 >2vhw_A Alanine dehydrogenase; 77.8 3 8.8E-05 21.0 3.9 67 24-94 51-118 (194)
35 >2yy8_A ATRM56, UPF0106 protei 77.7 4.7 0.00014 19.7 7.5 124 30-172 20-149 (201)
36 >3kw2_A Probable R-RNA methylt 75.4 5.4 0.00016 19.3 8.8 142 21-166 11-163 (183)
37 >3d6n_B Aspartate carbamoyltra 75.2 5.5 0.00016 19.3 7.0 76 7-93 15-91 (147)
38 >2wtz_A UDP-N-acetylmuramoyl-L 72.9 6.2 0.00018 18.9 4.9 123 7-131 11-139 (167)
39 >1zq6_A Otcase, ornithine carb 72.7 6.3 0.00019 18.9 5.0 83 12-94 5-89 (137)
40 >1pjc_A Protein (L-alanine deh 72.6 5.7 0.00017 19.2 4.2 65 24-92 51-116 (192)
41 >1vhk_A Hypothetical protein Y 72.6 6.3 0.00019 18.9 10.6 149 16-168 6-174 (191)
42 >2a9f_A Putative malic enzyme 71.3 6.8 0.0002 18.7 6.0 117 22-154 7-131 (132)
43 >2z04_A Phosphoribosylaminoimi 70.8 5.6 0.00017 19.2 3.9 57 24-91 8-65 (80)
44 >1vhy_A Hypothetical protein H 68.2 7.9 0.00023 18.3 10.4 141 16-167 5-160 (180)
45 >2v3j_A Essential for mitotic 66.9 8.4 0.00025 18.1 6.9 62 110-175 191-252 (258)
46 >1js1_X Transcarbamylase; alph 64.7 9.2 0.00027 17.9 4.8 67 16-93 8-75 (120)
47 >2ef0_A Ornithine carbamoyltra 58.9 12 0.00035 17.2 6.3 69 14-93 3-72 (119)
48 >2eez_A Alanine dehydrogenase; 58.8 10 0.0003 17.6 3.2 73 14-93 44-117 (193)
49 >3d4o_A Dipicolinate synthase 48.4 16 0.00048 16.3 3.0 50 30-93 19-68 (149)
50 >2rir_A Dipicolinate synthase, 44.3 20 0.00059 15.8 3.6 55 27-95 18-72 (156)
51 >1t2d_A LDH-P, L-lactate dehyd 40.9 22 0.00066 15.5 2.7 66 24-93 11-82 (151)
52 >1iuk_A Hypothetical protein T 38.0 25 0.00074 15.1 3.9 64 15-92 14-79 (140)
53 >3d64_A Adenosylhomocysteinase 36.0 27 0.00079 14.9 4.4 68 13-95 30-98 (163)
54 >2j6i_A Formate dehydrogenase; 33.7 29 0.00086 14.7 4.7 60 24-93 54-114 (196)
55 >3kbo_A Glyoxylate/hydroxypyru 30.5 33 0.00097 14.4 4.5 57 24-93 51-108 (185)
56 >2hjr_A Malate dehydrogenase; 30.3 33 0.00098 14.4 4.8 85 10-97 10-96 (328)
57 >1jbo_A C-phycocyanin alpha ch 29.7 34 0.001 14.3 2.7 46 149-203 83-128 (129)
58 >2uyy_A N-PAC protein; long-ch 29.6 34 0.001 14.3 4.4 57 24-91 37-94 (193)
59 >1w78_A FOLC bifunctional prot 28.4 36 0.0011 14.2 7.7 108 8-127 4-117 (136)
60 >2gcg_A Glyoxylate reductase/h 27.4 37 0.0011 14.0 4.0 59 23-93 54-113 (190)
61 >3ce6_A Adenosylhomocysteinase 26.6 38 0.0011 14.0 4.5 60 24-95 29-89 (158)
62 >2o3a_A UPF0106 protein AF_075 26.5 39 0.0011 13.9 8.6 114 31-170 24-144 (178)
63 >5mdh_A Malate dehydrogenase; 24.5 42 0.0012 13.7 2.3 69 25-97 12-93 (155)
64 >2g76_A 3-PGDH, D-3-phosphogly 23.5 44 0.0013 13.6 4.5 57 24-93 52-109 (185)
65 >1jbw_A Folylpolyglutamate syn 23.4 44 0.0013 13.6 7.1 44 8-51 4-48 (131)
66 >3h9u_A Adenosylhomocysteinase 22.8 45 0.0013 13.5 4.3 60 24-95 29-89 (157)
67 >1y7t_A Malate dehydrogenase; 22.7 42 0.0012 13.7 1.6 69 26-98 14-95 (156)
68 >3evt_A Phosphoglycerate dehyd 22.5 46 0.0014 13.5 4.7 57 24-93 53-110 (190)
69 >3hg7_A D-isomer specific 2-hy 21.8 47 0.0014 13.4 5.8 57 24-93 50-107 (184)
70 >2vml_B Phycocyanin beta chain 21.6 48 0.0014 13.4 3.0 56 148-203 78-136 (137)
71 >1hyh_A L-hicdh, L-2-hydroxyis 21.4 48 0.0014 13.3 2.0 72 24-95 8-81 (309)
72 >1lld_A L-lactate dehydrogenas 21.3 49 0.0014 13.3 2.4 78 13-97 6-89 (319)
73 >1jbo_B C-phycocyanin beta cha 20.8 50 0.0015 13.2 3.0 55 149-203 81-138 (139)
No 1
>>3ic6_A Putative methylase family protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.59A {Neisseria gonorrhoeae fa 1090} (A:1-201)
Probab=100.00 E-value=1.8e-35 Score=242.51 Aligned_cols=172 Identities=28% Similarity=0.381 Sum_probs=154.9
Q ss_pred HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC-------------------CCCCCHHHHHHHHHCCC
Q ss_conf 55321348968999428885479999999997199804980888-------------------89999999998531013
Q gi|254780904|r 6 PQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPR-------------------DGWPSEKARSSSANADC 66 (268)
Q Consensus 6 ~~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~-------------------~~~~~~~a~~~a~~a~~ 66 (268)
+.+......++|||+++++|+|+|+|+|+|++||++.++|++|+ .+++++++++.|+|+.+
T Consensus 9 ~~~~~~~~~~~ivld~v~~p~NiG~i~Rsa~afGv~~i~lv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~ga~~ 88 (201)
T 3ic6_A 9 PALPDYLGNIRIILTRTSHPANIGSAARAXKTXGLHRLTIVTPNLXATPXTENPPVFNPDDVQSFALPEESFILASGAAD 88 (201)
T ss_dssp CCCCGGGGGEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCCCCCBTTBSSCCCCCTTCGGGCCCCHHHHHHHGGGHH
T ss_pred CCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 23200205828999379888719999999998599869997887787534655431045321245566899999467698
Q ss_pred CCCCHHCCCCHHHHHHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEC
Q ss_conf 44420013778998412553101201122343034124203566655311588169999458884243100012322204
Q gi|254780904|r 67 VIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISF 146 (268)
Q Consensus 67 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~I 146 (268)
.+.........+.+.........+..........................+.++++||||+|++|||+++++.||..+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~~~l~~~d~~v~I 168 (201)
T 3ic6_A 89 VLHNAEIVATLDEALADTTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACNRLXTI 168 (201)
T ss_dssp HHHTCEEESCHHHHHTTEEEEEEECCSCC--CCCCBCHHHHHHHHHHHHHTTCEEEEEECBTTTBCCHHHHHTCSEEECC
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEC
T ss_conf 87665401239999975122102222100243332252100101222104787347876765577216899864222404
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7678734101688999999999996213665
Q gi|254780904|r 147 PVNPLFPSLNISQAVLLMVWECMENSIVSSE 177 (268)
Q Consensus 147 Pt~~~~~SLNLS~AvaIvlYEl~r~~~~~~~ 177 (268)
||.+.++|||||+|++|+|||++||...+..
T Consensus 169 P~~g~~~SLNvs~A~aI~l~e~~rq~~~~~~ 199 (201)
T 3ic6_A 169 NGNPDYFSLNLAQAVQVVCYEIFSQTDSPXT 199 (201)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHTTTSCCC
T ss_pred CCCCCCCCEEHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6789988670999999999999996167665
No 2
>>3gyq_A RRNA (adenosine-2'-O-)-methyltransferase; rRNA methyltransferase, spout mtases, SAM, trefoil knot, antibiotic resistance; HET: SAM; 2.45A {Streptomyces cyaneus} (A:113-272)
Probab=100.00 E-value=1.4e-34 Score=236.93 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=129.1
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEE
Q ss_conf 34896899942888547999999999719980498088889999999998531013444200137789984125531012
Q gi|254780904|r 11 SAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYAT 90 (268)
Q Consensus 11 ~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~ 90 (268)
.+..++|||++|++|+|||+|+|+|++||++.+++++|++.++.+++.+.++++.............+.........
T Consensus 4 ~~~~~~ivL~~v~~p~NiGai~Rta~a~G~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (160)
T 3gyq_A 4 SRRGDVVVLDGVKIVGNIGAIVRTSLALGASGIILVDSDITSIADRRLQRASRGYVFSLPVVLSGREEAIAFIRDSG--- 80 (160)
T ss_dssp HSCSCEEEEESCCCHHHHHHHHHHHHHTTCSEEEEESCCCSCTTCHHHHHHTTTGGGSSCEEEECHHHHHHHHHTTT---
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCC---
T ss_conf 35873999967622778999999998344664630245422111110014552111200122232114566663000---
Q ss_pred ECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 01122343034124203566655311588169999458884243100012322204767873410168899999999999
Q gi|254780904|r 91 TARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECME 170 (268)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r 170 (268)
.....................++++||||+|++||++++++.||..++|||.+.++|||||+|++|+|||+++
T Consensus 81 -------~~~~~~~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~e~l~~~d~~v~IP~~~~~~SLNvs~A~~I~lye~~~ 153 (160)
T 3gyq_A 81 -------MQLMTLKADGDISVKELGDNPDRLALLFGSEKGGPSDLFEEASSASVSIPMMSQTESLNVSVSLGIALHERID 153 (160)
T ss_dssp -------CEEEEECTTCSEEGGGGGGCCSCEEEEEESSTTCSCGGGTTTCCEEEECCCSCTTSCCCHHHHHHHHHHTTHH
T ss_pred -------HHEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHHH
T ss_conf -------0011001234432221335888648997688888799999748938993698998753199999999999996
Q ss_pred HHCCCC
Q ss_conf 621366
Q gi|254780904|r 171 NSIVSS 176 (268)
Q Consensus 171 ~~~~~~ 176 (268)
+.....
T Consensus 154 q~~~~~ 159 (160)
T 3gyq_A 154 RNLAAN 159 (160)
T ss_dssp HHSSCC
T ss_pred HHHHHC
T ss_conf 256425
No 3
>>1x7o_A Avirb, rRNA methyltransferase; SPOU, C-terminal knot, seMet; 2.37A {Streptomyces viridochromogenes} PDB: 1x7p_A* (A:119-287)
Probab=100.00 E-value=1.4e-34 Score=237.03 Aligned_cols=165 Identities=16% Similarity=0.095 Sum_probs=132.2
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCC
Q ss_conf 32134896899942888547999999999719980498088889999999998531013444200137789984125531
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFI 87 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~ 87 (268)
+......+.|||++|++|+|||+|+|+|++||++.+++++|+++++++++.+.++|+.+.+. ...+.+++++...+...
T Consensus 2 l~~~~~~~~vvl~~~~~p~NiGai~Rta~afG~~~i~~~~~~~~~~~~~~~r~s~g~~~~~~-~~~~~~~~~~~~~~~~~ 80 (169)
T 1x7o_A 2 IPVREDFLGVLFDRPTSPGNIGSIIRSADALGAHGLIVAGHAADVYDPKSVRSSTGSLFSLP-AVRVPSPGEVXDWVEAR 80 (169)
T ss_dssp SCCCTTCEEEEEESCSCHHHHHHHHHHHHHTTCCEEEEESSSSCTTSHHHHHHTTTGGGTSC-EEEESSHHHHHHHHHHH
T ss_pred HCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCHHHHHCC-CCCCCCCCCCCCCCHHH
T ss_conf 12466728999834121665998877887354676986313333331002102200211101-22334110000000134
Q ss_pred EEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 01201122343034124203566655311588169999458884243100012322204767873410168899999999
Q gi|254780904|r 88 YATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWE 167 (268)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYE 167 (268)
... .....................+..+++||||+|++||++++++.||.+++|||.+.++|||||+|++|+|||
T Consensus 81 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~lvfG~E~~Gl~~~~l~~~d~~v~IP~~g~~~SLNvs~A~aI~lye 155 (169)
T 1x7o_A 81 RAA-----GTPIVLVGTDEHGDCDVFDFDFTQPTLLLIGNETAGLSNAWRTLCDYTVSIPXAGSASSLNAANAATAILYE 155 (169)
T ss_dssp HHH-----TCCCEEEEECTTCSEEGGGSCTTSCEEEEECBTTTBSCHHHHHHCSEEEECCCSSSSCCCCHHHHHHHHHHH
T ss_pred HHC-----CCCEEEECCHHCCCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEHHHHHHHHHHHH
T ss_conf 433-----775687411000343211120268619998888878899999858989998899999713199999999999
Q ss_pred HHHHHCCCCCC
Q ss_conf 99962136654
Q gi|254780904|r 168 CMENSIVSSEK 178 (268)
Q Consensus 168 l~r~~~~~~~~ 178 (268)
++|+.......
T Consensus 156 ~~rq~~~~~~~ 166 (169)
T 1x7o_A 156 AVRQRISGRTA 166 (169)
T ss_dssp HHHHHSSCCCC
T ss_pred HHHHHHCCCCC
T ss_conf 99878628999
No 4
>>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.30A {Bordetella pertussis} (A:)
Probab=100.00 E-value=3.8e-34 Score=234.27 Aligned_cols=166 Identities=28% Similarity=0.348 Sum_probs=143.8
Q ss_pred HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCC--CCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCC
Q ss_conf 532134896899942888547999999999719980498088889--999999998531013444200137789984125
Q gi|254780904|r 7 QLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDG--WPSEKARSSSANADCVIDSVRVFSNLKEAIADL 84 (268)
Q Consensus 7 ~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~--~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~ 84 (268)
......+...|||++|++|+|+|+|+|+|++||++++++++|+++ ++++++.+.|+|+.+.+.....+.++++++.++
T Consensus 3 ~~~~~~~~~~vvl~~v~~p~NiG~i~R~a~~fG~~~i~l~~~~~~~~~~~~~~~r~s~g~~~~~~~~~~~~~~~~~l~~~ 82 (173)
T 3kty_A 3 AXTQAFSRVRFIXTQPSHPGNVGSAARAIKTXGFGELVLVAPRFPDXTAQPEAVALASGALDVLERAAVHDTLEEALAPV 82 (173)
T ss_dssp HHHHHHTTEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHHTTCHHHHHTCEEESCHHHHHTTC
T ss_pred HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEEECCHHHHHHHHC
T ss_conf 11241386599992798987499999999982998899989977777887889873387604544421033299998520
Q ss_pred CCCEEEECCCCCCCEE--EECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
Q ss_conf 5310120112234303--41242035666553115881699994588842431000123222047678734101688999
Q gi|254780904|r 85 HFIYATTARNRNNFKS--VLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVL 162 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~Ava 162 (268)
.....+.......... ..................++++||||+|++|||+++++.||..+.|||.+.++|||||+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~l~~~d~~v~IP~~g~~~SLNvs~A~a 162 (173)
T 3kty_A 83 TLAFALTTRVRDLGPPPCDIREAAGLARRHLDDTEAGVVAIVLGTERAGLTNAQIELCHRICHIPANPQYSSLNVAQALQ 162 (173)
T ss_dssp SEEEEEECC-----CCCEEHHHHHHHHHHHHHHSSSCCEEEEECCCC-CCCHHHHHTSSEEEECCCCSTTCCCCHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCEEHHHHHH
T ss_conf 22210000012233432322343322233333214676289977756788989997479799941898998267899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999962
Q gi|254780904|r 163 LMVWECMENS 172 (268)
Q Consensus 163 IvlYEl~r~~ 172 (268)
|+|||++||.
T Consensus 163 I~l~e~~rq~ 172 (173)
T 3kty_A 163 LAAWELRYAL 172 (173)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999975
No 5
>>1gz0_A Hypothetical tRNA/RRNA methyltransferase YJFH; 2'O-methyltransferase, knot, montreal- kingston bacterial structural genomics initiative, BSGI; 2.5A {Escherichia coli} (A:90-253)
Probab=100.00 E-value=4.8e-34 Score=233.62 Aligned_cols=157 Identities=16% Similarity=0.141 Sum_probs=126.2
Q ss_pred HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCC
Q ss_conf 25532134896899942888547999999999719980498088889999999998531013444200137789984125
Q gi|254780904|r 5 APQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADL 84 (268)
Q Consensus 5 ~~~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~ 84 (268)
.+.+...+..+.|||++|++|+|||+|+|+|++||++.++++.|+++++++++.+.++|+.+.+.... ++++++++..+
T Consensus 7 ~~~~~~~~~~~~vvl~~i~~p~NiG~i~Rt~~afG~~~i~~~~~~~~~~~~~~~r~s~g~~~~~~~~~-~~~~~~~~~~~ 85 (164)
T 1gz0_A 7 PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIR-VTNLARTXRXL 85 (164)
T ss_dssp HHHHHTCSSCEEEEEESCCCHHHHHHHHHHHHHHTCSEEEEESSSSCCCCHHHHHHHTTHHHHSCEEE-ESCHHHHHHHH
T ss_pred HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEE-ECCHHHHHHHH
T ss_conf 99973568977999966887018989999999708871798369766204556664316313752499-78999999985
Q ss_pred CCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 53101201122343034124203566655311588169999458884243100012322204767873410168899999
Q gi|254780904|r 85 HFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLM 164 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIv 164 (268)
.... ....................++++||||+|+.|||+++++.||.+++|||.+.++|||||+|++|+
T Consensus 86 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~e~l~~~d~~v~IP~~g~~~SLNva~A~~I~ 155 (164)
T 1gz0_A 86 QEEN----------IWIVGTAGEADHTLYQSKXTGRLALVXGAEGEGXRRLTREHCDELISIPXAGSVSSLNVSVATGIC 155 (164)
T ss_dssp HHTT----------CEEEEECTTCSEEGGGSCCCSSEEEEEEBTTTBSCHHHHHTCSEEEECCCSSSSCCCCHHHHHHHH
T ss_pred HHHH----------HHCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEEHHHHHHHH
T ss_conf 4300----------000222334566513331367559998778788999999858989996899999736499999999
Q ss_pred HHHHHHHH
Q ss_conf 99999962
Q gi|254780904|r 165 VWECMENS 172 (268)
Q Consensus 165 lYEl~r~~ 172 (268)
|||++||.
T Consensus 156 lye~~rq~ 163 (164)
T 1gz0_A 156 LFEAVRQR 163 (164)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHCC
T ss_conf 99999763
No 6
>>1ipa_A RRMH, RNA 2'-O-ribose methyltransferase; DEEP trefoil knot, rossmann fold, EL30-like fold, riken structural genomics/proteomics initiative; 2.40A {Thermus thermophilus} (A:109-274)
Probab=100.00 E-value=7.8e-33 Score=225.98 Aligned_cols=156 Identities=16% Similarity=0.135 Sum_probs=128.5
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCC--CHHHHHHCCC
Q ss_conf 32134896899942888547999999999719980498088889999999998531013444200137--7899841255
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFS--NLKEAIADLH 85 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~--~~~~a~~~~~ 85 (268)
+......+.|||++|++|+|||+|+|+|.+||++.+++++|. ++.++++.+.|+|+.+.+....... .+..+.....
T Consensus 2 l~~~~~~~~ivl~~~~~p~NiG~i~Rta~afG~~~i~~~~~~-~~~~~~~~r~s~ga~~~~~~~~~~~~~~~~~~~~~~~ 80 (166)
T 1ipa_A 2 YRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLVAGGV-DLYSPQVIRNSTGVVFSLRTLAASESEVLDWIKQHNL 80 (166)
T ss_dssp CCCCTTCEEEEEESCCCHHHHHHHHHHHHHHTCSEEEEESCC-CTTCHHHHHHTTTGGGTSCEEEECHHHHHHHHHHTTC
T ss_pred HCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC-CCCCCHHEECCCCEEEEEEEEECCHHHHHHHHHHCCE
T ss_conf 434689789999679786179999999997399789962883-3345211012443068999996157888887651230
Q ss_pred CCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 31012011223430341242035666553115881699994588842431000123222047678734101688999999
Q gi|254780904|r 86 FIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMV 165 (268)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvl 165 (268)
.+++++...... .....+..+++||||+|++||++++++.||.+++|||.+.++|||||+|++|+|
T Consensus 81 ~i~~~~~~~~~~--------------~~~~~~~~~~~lv~G~E~~Gls~~~l~~~d~~v~IP~~g~~~SLNva~A~~I~l 146 (166)
T 1ipa_A 81 PLVATTPHAEAL--------------YWEANLRPPVAIAVGPEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLL 146 (166)
T ss_dssp CEEEECTTCSSB--------------GGGSCCCSSEEEEECCTTSCCCHHHHHHCSEEEBCCCCSSCCCCCHHHHHHHHH
T ss_pred EEECCCCCCCCC--------------CEEECCCCCCEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 010111356532--------------201024777389986777888999997489799977999997004999999999
Q ss_pred HHHHHHHCCCCCC
Q ss_conf 9999962136654
Q gi|254780904|r 166 WECMENSIVSSEK 178 (268)
Q Consensus 166 YEl~r~~~~~~~~ 178 (268)
||++|+.......
T Consensus 147 ye~~rq~~~~~~~ 159 (166)
T 1ipa_A 147 YEALRQRLLRDRL 159 (166)
T ss_dssp HHHHHHHTC----
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999858766421
No 7
>>2i6d_A RNA methyltransferase, TRMH family; stuctural genomics, knot, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.85A {Porphyromonas gingivalis W83} (A:99-257)
Probab=100.00 E-value=1.6e-32 Score=224.07 Aligned_cols=152 Identities=17% Similarity=0.123 Sum_probs=118.7
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 48968999428885479999999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 12 AKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 12 ~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
...+.|||++|++|+|||+|+|+|++||++.+++++|+++++++++.+.|.|+.+.+....+ +++++++..+.
T Consensus 3 ~~~~~vvl~~~~~~~NiG~i~Rt~~a~G~~~i~l~~~~~~~~~~~~~r~a~ga~~~i~~~~~-~~~~~~~~~~~------ 75 (159)
T 2i6d_A 3 VEGLTLLLDGVQDPGNVGTILRTADWFGIRHVWLGTGSADVFSPKVVQASXGALARVQPTPL-KNTVDTLAYFR------ 75 (159)
T ss_dssp CCSEEEEEESCCCHHHHHHHHHHHHHHTCCEEEECTTCCCTTSHHHHHTSTTGGGTCEEEEC-SCHHHHHHHHH------
T ss_pred CCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC-CCCHHHHHHHH------
T ss_conf 67769998500355559999844650111157774023333443555421111101022233-32100223431------
Q ss_pred CCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCC-----CCCCCHHHHHHHHHHHH
Q ss_conf 1122343034124203566655311588169999458884243100012322204767-----87341016889999999
Q gi|254780904|r 92 ARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVN-----PLFPSLNISQAVLLMVW 166 (268)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~-----~~~~SLNLS~AvaIvlY 166 (268)
.........................++++||||+|++||++++++.||..++||+. +..+|||||+|++|+||
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~l~~~d~~v~IP~~~~~m~g~~~SLNva~A~~I~ly 153 (159)
T 2i6d_A 76 --RQGIPVYGAFLDGQSLYEAPLPNFTEPAILVLGSEGRGISPEVAAEITDRLTIPASGLSVKGHTESLNVAIATAILCS 153 (159)
T ss_dssp --HTTCCEEEEEEEEEETTTSCCCCTTSCEEEEEEBTTTBSCHHHHTTCSEEEECCCCSSCC----CCCCHHHHHHHHHH
T ss_pred --CCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHH
T ss_conf --157543222234542100222057763699981566678999998589789989887788999872139999999999
Q ss_pred HHHHHH
Q ss_conf 999962
Q gi|254780904|r 167 ECMENS 172 (268)
Q Consensus 167 El~r~~ 172 (268)
|++||.
T Consensus 154 e~~rq~ 159 (159)
T 2i6d_A 154 EWRRRS 159 (159)
T ss_dssp HHHHTC
T ss_pred HHHHCC
T ss_conf 998478
No 8
>>1mxi_A YIBK, hypothetical tRNA/RRNA methyltransferase HI0766; S-adenosylhomocysteine, SPOU family, structure 2 function project; HET: SAH; 1.70A {Haemophilus influenzae} (A:)
Probab=100.00 E-value=2.3e-32 Score=223.00 Aligned_cols=151 Identities=15% Similarity=0.151 Sum_probs=126.1
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 68999428885479999999997199804980888899999999985310134442001377899841255310120112
Q gi|254780904|r 15 PVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARN 94 (268)
Q Consensus 15 ~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 94 (268)
++|||++|++|+|||+|+|+|++||++.+++++|+++++++++.+.|+|+.+.+.. ..+.++.+++.++.....+....
T Consensus 2 l~vvl~~~~~~~NvG~i~Rta~afG~~~i~~~~~~~~~~~~~~~r~s~g~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~ 80 (160)
T 1mxi_A 2 LDIVLYEPEIPQNTGNIIRLCANTGFRLHLIEPLGFTWDDKRLRRSGLDYHEFAEI-KRHKTFEAFLESEKPKRLFALTT 80 (160)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHHHTCEEEEESSCSSCTTCHHHHTTSCCGGGSSSC-EEESSHHHHHHHHCCSEEEEECT
T ss_pred EEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEECCE-EEHHHHHHHHHHHHCCCEEEECC
T ss_conf 29999189898839999999997599899972787765341002200012230010-10017888876541143233111
Q ss_pred CCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCE--EECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 2343034124203566655311588169999458884243100012322--20476787341016889999999999962
Q gi|254780904|r 95 RNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAI--ISFPVNPLFPSLNISQAVLLMVWECMENS 172 (268)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~--v~IPt~~~~~SLNLS~AvaIvlYEl~r~~ 172 (268)
... .........++++||||+|++|||+++++.||.. ++|||.+.++|||||+|++|+|||+.|+.
T Consensus 81 ~~~------------~~~~~~~~~~~~alv~G~E~~Gls~e~l~~~d~~v~i~IP~~g~~~SLNvsvA~aI~l~e~~r~~ 148 (160)
T 1mxi_A 81 KGC------------PAHSQVKFKLGDYLMFGPETRGIPMSILNEMPMEQKIRIPMTANSRSMNLSNSVAVTVYEAWRQL 148 (160)
T ss_dssp TCS------------SBGGGSCCCTTEEEEECCTTTCSCHHHHTTSCGGGEEBCCCCTTCCCCCHHHHHHHHHHHHHHHT
T ss_pred CCC------------CCHHCCCCCCCEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHCC
T ss_conf 223------------32000134563089994477888988997436774997779999984079999999999999715
Q ss_pred CCCCCC
Q ss_conf 136654
Q gi|254780904|r 173 IVSSEK 178 (268)
Q Consensus 173 ~~~~~~ 178 (268)
......
T Consensus 149 ~~~~~~ 154 (160)
T 1mxi_A 149 GYKGAV 154 (160)
T ss_dssp TTTTCC
T ss_pred CCCCCC
T ss_conf 899888
No 9
>>3ilk_A Uncharacterized tRNA/RRNA methyltransferase HI0380; APC63004, methylase family protein, haemophilus influenzae RD KW20; 2.01A {Haemophilus influenzae} (A:1-174)
Probab=100.00 E-value=2.1e-32 Score=223.29 Aligned_cols=162 Identities=31% Similarity=0.464 Sum_probs=136.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEE
Q ss_conf 13489689994288854799999999971998049808888999999999853101344420013778998412553101
Q gi|254780904|r 10 NSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYA 89 (268)
Q Consensus 10 ~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~ 89 (268)
..+.+++|||++|++|+|+|+|+|+|++||++++++++|. ++++++.+.++|+.+.+....+..........+.....
T Consensus 3 ~~~~~~~vvl~~v~~~~NiG~i~Rsa~~fG~~~i~~~~~~--~~~~~~~~~s~ga~~~~~~~~~~~~~~~~~~l~~~~~~ 80 (174)
T 3ilk_A 3 AXLENIRIVLIETSHSGNIGSAARAXKTXGLTQLCLVSPK--SVDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIG 80 (174)
T ss_dssp CSSTTEEEEEESCCSHHHHHHHHHHHHHHTCCEEEEESCS--CCSHHHHHTTTTCHHHHHHCEEESSHHHHTTTCSEEEE
T ss_pred CCHHCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC--CCCHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHH
T ss_conf 2333878998089898709999999997499889995899--99989988633412234317994206566665556666
Q ss_pred EECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 20112234303412420356665531158816999945888424310001232220476787341016889999999999
Q gi|254780904|r 90 TTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECM 169 (268)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~ 169 (268)
+............. ............++++||||+|+.||++++++.||.+++|||.+.++|||||+|++|+|||++
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lv~G~E~~Gls~e~l~~~d~~v~IP~~~~~~SLNvs~A~aI~l~e~~ 157 (174)
T 3ilk_A 81 TSARLRHLQNTLIE---PRECAEKVVAYKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLAXAVQLVSYELR 157 (174)
T ss_dssp ECCCCGGGTTTEEC---HHHHHHHHHHCSSCEEEEECBTTTBCCHHHHHTCSEEECCCCCTTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCC---CCCCHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 66542034311014---420000001478866886066668998122201001354126898522538999999999999
Q ss_pred HHHCCCC
Q ss_conf 9621366
Q gi|254780904|r 170 ENSIVSS 176 (268)
Q Consensus 170 r~~~~~~ 176 (268)
++.....
T Consensus 158 ~q~~~~~ 164 (174)
T 3ilk_A 158 XAFLVQN 164 (174)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
T ss_conf 9764202
No 10
>>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens} (A:)
Probab=99.98 E-value=4.1e-32 Score=221.47 Aligned_cols=158 Identities=16% Similarity=0.200 Sum_probs=125.5
Q ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHC-CCCHHHHHHCCCCC
Q ss_conf 21348968999428885479999999997199804980888899999999985310134442001-37789984125531
Q gi|254780904|r 9 QNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRV-FSNLKEAIADLHFI 87 (268)
Q Consensus 9 ~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~-~~~~~~a~~~~~~~ 87 (268)
......+.|+|++|++|+|||+|+|+|++||++.++++++.+ ++++++.+.++|+.+.+....+ ..+++.++....
T Consensus 21 ~~~~~~~~v~l~~~~~~~NiG~i~Rta~afG~~~i~~~~~~~-~~~~~~~r~s~g~~~~~~~~~~~~~~~~~~~~~~~-- 97 (184)
T 2ha8_A 21 GKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQC-ISDKQFQHLSVSAEQWLPLVEVKPPQLIDYLQQKK-- 97 (184)
T ss_dssp CCCCCCCEEECTTCCCHHHHHHHHHHHHHTTCSEEEESCGGG-GGSHHHHHHHTTGGGTSCEEECCGGGHHHHHHHHH--
T ss_pred CCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCC-CCCHHHHEEEECCEEEECHHCCCCHHHHHHHHHHC--
T ss_conf 576788899981686863088999999962997066425555-67856620000010010101023224444555420--
Q ss_pred EEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 01201122343034124203566655311588169999458884243100012322204767873410168899999999
Q gi|254780904|r 88 YATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWE 167 (268)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYE 167 (268)
........................++++||||+|+.||+++.++.||.+++|||.+.++|||||+|++|+|||
T Consensus 98 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~l~~~d~~v~IP~~g~~~SLNvs~A~~I~l~e 170 (184)
T 2ha8_A 98 -------TEGYTIIGVEQTAKSLDLTQYCFPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWE 170 (184)
T ss_dssp -------HTTCEEEEECCCTTCEEGGGCCCCSSEEEEECBTTTBSCHHHHTTCSEEEECCCCSSSSCCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCEEHHHHHHHHHHH
T ss_conf -------1222222332222233321000357855885555579999999868989996295899702599999999999
Q ss_pred HHHHHCCCC
Q ss_conf 999621366
Q gi|254780904|r 168 CMENSIVSS 176 (268)
Q Consensus 168 l~r~~~~~~ 176 (268)
++++.....
T Consensus 171 ~~r~~~~~~ 179 (184)
T 2ha8_A 171 YTRQQLLSH 179 (184)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHC
T ss_conf 998550214
No 11
>>3e5y_A TRMH family RNA methyltransferase; ssgcid, protein knot, decode, structural genomics; 2.40A {Burkholderia pseudomallei 305} (A:)
Probab=99.97 E-value=5.1e-32 Score=220.88 Aligned_cols=155 Identities=19% Similarity=0.131 Sum_probs=125.5
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEE
Q ss_conf 34896899942888547999999999719980498088889999999998531013444200137789984125531012
Q gi|254780904|r 11 SAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYAT 90 (268)
Q Consensus 11 ~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~ 90 (268)
.+..++|||++|++|+|+|+|+|+|++||++.+++++|+++++++.+.+.|.|+.+.+. ...+.++++++..+.....
T Consensus 2 ~~~~~~vvl~~i~~~~NiG~i~Rta~afG~~~i~~~~~~~~~~~~~~~~~s~g~~~~~~-~~~~~~~~~~~~~~~~~~~- 79 (160)
T 3e5y_A 2 PGSMFNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQ-MRVHRDWDAFVAAEAPDPA- 79 (160)
T ss_dssp ---CCEEEEESCCCHHHHHHHHHHHHHHTCEEEEESSCSSCCCHHHHHHTTCCHHHHHT-CEEESSHHHHHHHHCCCGG-
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHC-CHHCCCHHHHHHHHHCCCE-
T ss_conf 97756999947998885999999999849967860699767452334444574232211-1102427776654203540-
Q ss_pred ECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC--EEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 0112234303412420356665531158816999945888424310001232--22047678734101688999999999
Q gi|254780904|r 91 TARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNA--IISFPVNPLFPSLNISQAVLLMVWEC 168 (268)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~--~v~IPt~~~~~SLNLS~AvaIvlYEl 168 (268)
...................++++||||+|+.||+++++++||. .++|||.+.++|||||+|++|+|||+
T Consensus 80 ---------~i~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~e~l~~cd~~~~v~IP~~~~~~SLNvsvA~aI~l~e~ 150 (160)
T 3e5y_A 80 ---------RMFAFTTRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEA 150 (160)
T ss_dssp ---------GEEEECSTTCEEGGGSCCCTTCEEEEEBTTTBSCHHHHTTSCGGGEEECCCCSSSCCCCHHHHHHHHHHHH
T ss_pred ---------EEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEECCCCCCCCEEEHHHHHHHHHHHH
T ss_conf ---------69984023443221234564118997165554899999862367636027999986377999999999999
Q ss_pred HHHHCCCC
Q ss_conf 99621366
Q gi|254780904|r 169 MENSIVSS 176 (268)
Q Consensus 169 ~r~~~~~~ 176 (268)
+|+.....
T Consensus 151 ~rq~~~~~ 158 (160)
T 3e5y_A 151 WRQAGFEG 158 (160)
T ss_dssp HHHTTTTT
T ss_pred HHCCCCCC
T ss_conf 98028988
No 12
>>1v2x_A TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus} (A:21-176)
Probab=99.97 E-value=1.6e-32 Score=224.06 Aligned_cols=149 Identities=18% Similarity=0.280 Sum_probs=113.5
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHH--HHHHCCCCCEEEE
Q ss_conf 96899942888547999999999719980498088889999999998531013444200137789--9841255310120
Q gi|254780904|r 14 GPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLK--EAIADLHFIYATT 91 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~--~a~~~~~~~~~~~ 91 (268)
.++|||++|++|+|||+|+|+|++||++++++++|+++.++.+ +.++++.+...........+ ...+...+.+...
T Consensus 2 ~l~ivl~~~~~~~NiG~i~Rta~a~G~~~i~i~~~~~~~~~~~--~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (156)
T 1v2x_A 2 DLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFN--ETSGGSHKWVYLRVHPDLHEAFRFLKERGFTVYAT 79 (156)
T ss_dssp TEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCCCC--SSCSSGGGTSEEEEESSHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEE--EECCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 9799996798866399999999981986120234423430000--10012214430112454223689998658853112
Q ss_pred CCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 11223430341242035666553115881699994588842431000123222047678734101688999999999996
Q gi|254780904|r 92 ARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMEN 171 (268)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r~ 171 (268)
...............++++||||+|++||++++++.||.+++|||.+.++|||||+|++|+|||++|+
T Consensus 80 ------------~~~~~~~~l~~~~~~~~~~lv~G~E~~Gls~e~l~~~d~~v~IP~~g~~~SLNvs~A~~I~lye~~r~ 147 (156)
T 1v2x_A 80 ------------ALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQ 147 (156)
T ss_dssp ------------CCCTTSEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSSEEEECCCCSSCSCCCHHHHHHHHHHHHHHH
T ss_pred ------------CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf ------------22223322101257888089966766646689997249289958999866332999999999999999
Q ss_pred HCCCC
Q ss_conf 21366
Q gi|254780904|r 172 SIVSS 176 (268)
Q Consensus 172 ~~~~~ 176 (268)
.....
T Consensus 148 ~~~~~ 152 (156)
T 1v2x_A 148 RLKAG 152 (156)
T ss_dssp HHHHT
T ss_pred HHHCC
T ss_conf 98546
No 13
>>1zjr_A TRNA (guanosine-2'-O-)-methyltransferase; methylase, RNA modifying enzyme, topological knot; 1.85A {Aquifex aeolicus} (A:24-180)
Probab=99.97 E-value=7.7e-32 Score=219.72 Aligned_cols=152 Identities=13% Similarity=0.103 Sum_probs=119.5
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 96899942888547999999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 14 GPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
..+|||++|++|+|+|+|+|+|++||++.+++++|++. +++++.+.|+|+.+.+....+....+.........
T Consensus 2 ~~~ivl~~~~~p~NiG~i~Rta~afG~~~i~~~~~~~~-~~~~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (157)
T 1zjr_A 2 DLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEGK-KAKINEGITQGSHKWVFIEKVDNPVQKLLEFKNRG------ 74 (157)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHTEEEEEEECSSTT-CCCCCHHHHTTGGGSSEEEECSCHHHHHHHHHHTT------
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCC-CCHHHHHHHCCCCCCCCEEEEEECHHHCCCCCCCC------
T ss_conf 98999958988167899999998659978998589988-50667987433443464689841033201212221------
Q ss_pred CCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 22343034124203566655311588169999458884243100012322204767873410168899999999999621
Q gi|254780904|r 94 NRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSI 173 (268)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r~~~ 173 (268)
.....................++++||||+|+.|||+++++.||..++|||.+.++|||||+|++|+|||++|+..
T Consensus 75 ----~~ii~~~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~~~~~~~d~~v~IP~~g~~~SLNva~A~aIvl~e~~rq~~ 150 (157)
T 1zjr_A 75 ----FQIVATWLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQRE 150 (157)
T ss_dssp ----CEEEEEBCSTTSEEGGGSCTTSSEEEEEECBTTBSCHHHHTTCSEEEECCCCSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ----EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
T ss_conf ----0122101233322220135776259996684343789999558869998899999746699999999999998687
Q ss_pred CCC
Q ss_conf 366
Q gi|254780904|r 174 VSS 176 (268)
Q Consensus 174 ~~~ 176 (268)
...
T Consensus 151 ~~~ 153 (157)
T 1zjr_A 151 EKG 153 (157)
T ss_dssp HTT
T ss_pred HCC
T ss_conf 448
No 14
>>3dcm_X AdoMet, uncharacterized protein TM_1570; trefoil knot, spout mtase, adoMet binding, transferase; HET: SAM; 2.00A {Thermotoga maritima} (X:)
Probab=99.97 E-value=6.1e-33 Score=226.66 Aligned_cols=166 Identities=12% Similarity=0.113 Sum_probs=136.7
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCC-----------CCHHHHHHHHHCCCCCCCHHCCCCHH
Q ss_conf 1348968999428885479999999997199804980888899-----------99999998531013444200137789
Q gi|254780904|r 10 NSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGW-----------PSEKARSSSANADCVIDSVRVFSNLK 78 (268)
Q Consensus 10 ~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~-----------~~~~a~~~a~~a~~~~~~~~~~~~~~ 78 (268)
.....++|||+++++|+|+|+|+|+|++||++.|++++|++++ +++++.+.++++.+.+.....+.+++
T Consensus 13 ~~~~~~~ivl~~i~~p~NiG~IiRta~~~G~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~r~a~~~~~~~~~~~~~~~~~ 92 (192)
T 3dcm_X 13 PIKGKDGSIISTAVTNLDVHDIARTARTYNLKGYYIVTNLRAQQDMVSKMLKFWREGFGSRYNPSRAESLKLVKLKSYLE 92 (192)
T ss_dssp SEECTTCSEECCCCCHHHHHHHHHHHHHTTCSEEEEECCCHHHHHHHHHHHHHHHTSGGGGTCSSSHHHHTTEEEESSHH
T ss_pred CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCEEEECCHH
T ss_conf 11276674899714588899999999976996799976760078888778760775688884646898850148843477
Q ss_pred HHHHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEE-ECCCCCCCCCHHH
Q ss_conf 984125531012011223430341242035666553115881699994588842431000123222-0476787341016
Q gi|254780904|r 79 EAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAII-SFPVNPLFPSLNI 157 (268)
Q Consensus 79 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v-~IPt~~~~~SLNL 157 (268)
+++.++.....+............................++++||||+|+.||++|+++.||..+ +|||.+.++||||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~e~~~~~~~~v~~IP~~~~~~SLNv 172 (192)
T 3dcm_X 93 DVLEDIESVEGERPLIFFTSAKKRENDISFEEGRRIIIETEKPVLILLGTGWGLPDEILEISDYVLEPIRAQSDFNHLSV 172 (192)
T ss_dssp HHHHHHHHHHSSCCEEEECCSSCCSSCBCHHHHHHHHHHCCSCEEEEECCTTCCCHHHHTTCSEEBCCTTTTSSCCCCCH
T ss_pred HHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHEEECCCCCCCCEEEH
T ss_conf 64212555313246875225676787524688998753248859998257778799999862153684789999974669
Q ss_pred HHHHHHHHHHHHHHHCCC
Q ss_conf 889999999999962136
Q gi|254780904|r 158 SQAVLLMVWECMENSIVS 175 (268)
Q Consensus 158 S~AvaIvlYEl~r~~~~~ 175 (268)
|+|++|+|||++|+....
T Consensus 173 s~A~aI~lye~~rq~~~~ 190 (192)
T 3dcm_X 173 RAAAAIIIDRLIGENYAR 190 (192)
T ss_dssp HHHHHHHHHHHTTTCCC-
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999997354102
No 15
>>3ilk_A Uncharacterized tRNA/RRNA methyltransferase HI0380; APC63004, methylase family protein, haemophilus influenzae RD KW20; 2.01A {Haemophilus influenzae} (A:175-244)
Probab=99.45 E-value=2.6e-13 Score=103.16 Aligned_cols=68 Identities=22% Similarity=0.386 Sum_probs=62.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 346888899999999999987289987543899999999986316999899999999999999841034211
Q gi|254780904|r 185 TPATKGELLSFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQSSRR 256 (268)
Q Consensus 185 ~~a~~~~l~~~~~~l~~~l~~~~f~~~~~~~~~~~~~lrrl~~R~~l~~~E~~~L~Gil~~l~~~~~~~~~~ 256 (268)
++|+.++++.|++|+++.|+++||++|+ .++++|||+|+|+.||.+|+++||||+++++|+.++..+.
T Consensus 2 ~~A~~~e~e~~~~hle~~L~~igfl~p~----~~~~~lRrlf~Ra~l~~~Ev~iLrGil~~i~~~~~~~~~~ 69 (70)
T 3ilk_A 2 NYPTTDQLAYFFDYTERIYQSLGFIQNQ----GVXRKLKRLYYRAKLEKNELNILNGXLSAVEKRIDLTKED 69 (70)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCCCST----HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCH----HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 4668889988999999999865887828----9999999999837999999999999999999986421048
No 16
>>1k3r_A Conserved protein MT0001; beta barrel, structural genomics, PSI, protein structure initiative; 2.30A {Methanothermobacterthermautotrophicus} (A:1-84,A:161-268)
Probab=94.38 E-value=0.33 Score=27.00 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=81.5
Q ss_pred EEECCCCCC----HHHHHHHHHHHCCCCEEEECCCCCCCCCHH------------HHHHHH--------HC-CCCCCCHH
Q ss_conf 994288854----799999999971998049808888999999------------999853--------10-13444200
Q gi|254780904|r 18 ILVDPQLGE----NIGMVARAMWNFNLTQLRLVNPRDGWPSEK------------ARSSSA--------NA-DCVIDSVR 72 (268)
Q Consensus 18 VLv~p~~p~----NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~------------a~~~a~--------~a-~~~~~~~~ 72 (268)
||.+.+++. -+|-|||+|.-|+++.+++-+........- -.+... .+ .+......
T Consensus 14 il~~~~~~~~~t~~~g~IARaa~if~Vdeivvy~d~~~~~~~~l~~iL~YletP~YLRk~lfp~~~~Lk~a~YWGy~Vr~ 93 (192)
T 1k3r_A 14 LTAETGDLKIKTYKVVLIARAASIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVRYWGYEVLD 93 (192)
T ss_dssp TTTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEECSSCCCHHHHHHHHHHHHSCHHHHHHHCCCCGGGGGGSCCCCEEEE
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCEEEEE
T ss_conf 95668998999999999999998226667999758997666899999888528887887536898563230667769997
Q ss_pred CCCCHHHHHHCCC--CCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 1377899841255--31012011223430341242035666553115881699994588842431000123222047678
Q gi|254780904|r 73 VFSNLKEAIADLH--FIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNP 150 (268)
Q Consensus 73 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~ 150 (268)
...++.++.+.|. ..++|+.+..... .............+.+.+|||.=..||.....+. ++-++|-.
T Consensus 94 ~~~sL~~v~~~~~~dl~IgTS~~G~~i~-------~~~~~l~~~~~~~~~~lvvFGgP~~Gl~~~lfD~--~iNt~P~Q- 163 (192)
T 1k3r_A 94 TRRNLAESLKTVGADVVVATSRNASPIT-------SILDEVKTRMRGAREAAILFGGPYKGLPEIDADI--WVNTLPGQ- 163 (192)
T ss_dssp EEEEHHHHHHHHCCSEEEEECTTSCBTT-------TSHHHHHHHHTTCSEEEEECCCSSSCCCSCCCSE--EEBSSTTC-
T ss_pred EECCHHHCCCCCCCCEEEEECCCCCCCH-------HHCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCE--EEECCCCC-
T ss_conf 6231765631369985999799988520-------1012212345678708999898656874342684--89738998-
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 73410168899999999999
Q gi|254780904|r 151 LFPSLNISQAVLLMVWECME 170 (268)
Q Consensus 151 ~~~SLNLS~AvaIvlYEl~r 170 (268)
.....=.=.|+-|.|-.+.-
T Consensus 164 gsrTIRTEEAi~itLa~L~~ 183 (192)
T 1k3r_A 164 CTETVRTEEAVLATLSVFNM 183 (192)
T ss_dssp SSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHH
T ss_conf 87666089999999999982
No 17
>>1z85_A Hypothetical protein TM1380; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; 2.12A {Thermotoga maritima MSB8} (A:83-234)
Probab=93.26 E-value=0.54 Score=25.63 Aligned_cols=135 Identities=14% Similarity=0.073 Sum_probs=75.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC--C-HHHHHH----HHH-CCCCCCCHHCCCCHHHHHHCCCC
Q ss_conf 689994288854799999999971998049808888999--9-999998----531-01344420013778998412553
Q gi|254780904|r 15 PVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWP--S-EKARSS----SAN-ADCVIDSVRVFSNLKEAIADLHF 86 (268)
Q Consensus 15 ~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~--~-~~a~~~----a~~-a~~~~~~~~~~~~~~~a~~~~~~ 86 (268)
.+.++..+-.+...--+++-|.-.|++.++.+.-.-... . ++-.+. +.- ....+.......++.+..
T Consensus 4 ~i~l~~a~~K~~~~~~il~katELGv~~i~p~~t~rs~~~~k~~r~~~i~~ea~kQs~r~~~P~i~~~~~l~~~~----- 78 (152)
T 1z85_A 4 KLSVVVPIGRWERTRFLIEKCVELGVDEIFFHKFERSQHEISLDKAKIVVREAAKQCKRYLFPKVSFLEKLEFSG----- 78 (152)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCSEEEEECCTTCCCCCCHHHHHHHHHHHHHHHTCSBCCEEEECCSCCCCS-----
T ss_pred CCEEEEEECCCCHHHHHHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC-----
T ss_conf 324787504320168887675502112799875211120121477899999988733985588881010324456-----
Q ss_pred CEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 10120112234303412420356665531158816999945888424310001232220476787341016889999999
Q gi|254780904|r 87 IYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVW 166 (268)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlY 166 (268)
. ..................+++.+++|+|+ |.|.+|.+..+.-+ .|.+-.-..|=...|+-..+.
T Consensus 79 ------------~-~~~~~~~~~~~~~~~~~~~~i~i~IGPEG-Gfs~~Ei~~~~~g~-~~vsLg~~ILR~ETA~i~als 143 (152)
T 1z85_A 79 ------------N-VITLDLDASQNLLDANLEGSITVVVGPEG-GFSEKERELLRSST-TIVSLGKKILRFETAAILTVG 143 (152)
T ss_dssp ------------E-EEEECC---CCCSSSCCCSSEEEEECCTT-CCCHHHHHHHHHHS-EEC------CCHHHHHHHHHH
T ss_pred ------------C-CEEECCCHHHCCCHHCCCCCEEEEECCCC-CCCHHHHHHHHCCC-EEEECCCCCCHHHHHHHHHHH
T ss_conf ------------5-24542001210000204785799989978-99999999998499-898679982335619999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780904|r 167 ECM 169 (268)
Q Consensus 167 El~ 169 (268)
-+.
T Consensus 144 ~~~ 146 (152)
T 1z85_A 144 YIA 146 (152)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 18
>>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex; HET: PSQ; 1.70A {Escherichia coli} (G:153-278)
Probab=92.31 E-value=0.64 Score=25.15 Aligned_cols=79 Identities=16% Similarity=0.240 Sum_probs=61.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547999999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|+++..-+..=+=|.+..+.-||+ +++++.|....+.+.....+.. +...-....++.++++++++++.+..+.
T Consensus 2 ~glki~~vGd~~~rv~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDviy~~~ 80 (126)
T 1duv_G 2 NEMTLVYAGDARNNMGNSMLEAAALTGL-DLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDV 80 (126)
T ss_dssp GGCEEEEESCTTSHHHHHHHHHHHHHCC-EEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCC-EEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCCEEEEHH
T ss_conf 6427998357543206778877632682-243113423488489999998764047986899724322115797873104
Q ss_pred C
Q ss_conf 1
Q gi|254780904|r 92 A 92 (268)
Q Consensus 92 ~ 92 (268)
-
T Consensus 81 w 81 (126)
T 1duv_G 81 W 81 (126)
T ss_dssp S
T ss_pred H
T ss_conf 6
No 19
>>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} (A:153-274)
Probab=91.72 E-value=0.74 Score=24.76 Aligned_cols=80 Identities=11% Similarity=0.160 Sum_probs=60.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547999999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|+++.--++.=+=|.+.++.-||+ +++++.|....+.+.....+.. +...-....++.+.++++++++.+..++
T Consensus 2 ~g~ki~~vGd~~~rv~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~i~~~~~~~ea~~~aDviy~~~ 80 (122)
T 1dxh_A 2 HDISYAYLGDARNNMGNSLLLIGAKLGM-DVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDV 80 (122)
T ss_dssp GGCEEEEESCCSSHHHHHHHHHHHHTTC-EEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC-EEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEE
T ss_conf 6848998078764079999999987699-899988953488989999999999973998999869999828898994410
Q ss_pred CC
Q ss_conf 11
Q gi|254780904|r 92 AR 93 (268)
Q Consensus 92 ~~ 93 (268)
-.
T Consensus 81 w~ 82 (122)
T 1dxh_A 81 WV 82 (122)
T ss_dssp CS
T ss_pred EE
T ss_conf 76
No 20
>>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, JCSG, protein structure initiative, PSI; 2.25A {Thermotoga maritima} (A:165-294)
Probab=90.90 E-value=1.1 Score=23.70 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=58.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547999999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|.++.--+..=+-|.++++.-||+ ++.++.|....+.+.....+.. +...-....++.++++++++.+.+...+
T Consensus 2 ~glkia~vGD~~~rv~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDviytd~ 80 (130)
T 1vlv_A 2 KGVKVVFMGDTRNNVATSLMIACAKMGM-NFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 80 (130)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHTTC-EEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEECCCCCEEEEHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHH
T ss_conf 4455146415555064137889987698-499996113235423454454420012355334359999983466455446
Q ss_pred CCC
Q ss_conf 112
Q gi|254780904|r 92 ARN 94 (268)
Q Consensus 92 ~~~ 94 (268)
-..
T Consensus 81 w~~ 83 (130)
T 1vlv_A 81 WAS 83 (130)
T ss_dssp CC-
T ss_pred HHH
T ss_conf 654
No 21
>>1v6z_A Hypothetical protein TTHA0657; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferase; 2.00A {Thermus thermophilus HB8} (A:68-228)
Probab=89.59 E-value=1.4 Score=23.02 Aligned_cols=140 Identities=22% Similarity=0.213 Sum_probs=85.4
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCC---CCC-HHHHH-------HH-HHCCCCCCCHHCCCCHHHHHH
Q ss_conf 6899942888547999999999719980498088889---999-99999-------85-310134442001377899841
Q gi|254780904|r 15 PVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDG---WPS-EKARS-------SS-ANADCVIDSVRVFSNLKEAIA 82 (268)
Q Consensus 15 ~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~---~~~-~~a~~-------~a-~~a~~~~~~~~~~~~~~~a~~ 82 (268)
++.+...+-.+..+--+++-|.-+|++.++++.-.-. ..+ .+.-+ ++ ......+.......++.+++.
T Consensus 5 ~i~l~~a~~k~~~~~~il~ka~ElGv~~i~p~~s~rs~~k~~~~~k~~r~~~i~~ea~kQs~r~~~P~I~~~~~l~~~~~ 84 (161)
T 1v6z_A 5 EVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEXGEGKLRRLRAVALEAAKQSGRVVVPEVLPPIPLKAVPQ 84 (161)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTTCSEEEEEECTTCSCSCCCHHHHHHHHHHHHHHHHHTTCSSCCEECCCEEGGGCCC
T ss_pred CEEEEEEECCCHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 04899720342047889876540131389987314201112343212067899999998658876870146668899743
Q ss_pred CCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
Q ss_conf 25531012011223430341242035666553115881699994588842431000123222047678734101688999
Q gi|254780904|r 83 DLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVL 162 (268)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~Ava 162 (268)
+....++.. .............+++.+++|+|+ |.|.+|++.....=-.|.+=.-..|=...|+-
T Consensus 85 ~~~~~~~~~--------------~~~~~~~~~~~~~~~i~i~IGPEG-Gfs~~Ei~~l~~~g~~~v~LG~~ILR~ETA~i 149 (161)
T 1v6z_A 85 VAQGLVAHV--------------GATARVREVLDPEKPLALAVGPEG-GFAEEEVALLEARGFTPVSLGRRILRAETAAL 149 (161)
T ss_dssp CSSEEEECT--------------TCCCCHHHHCCTTSCEEEEECCTT-CCCHHHHHHHHHHTEEEECCCSSCCCHHHHHH
T ss_pred HCCCCCCCC--------------CCCCCCCCCCCCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHH
T ss_conf 200000112--------------334332211145675079978987-88999999999789889778998126774999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780904|r 163 LMVWECM 169 (268)
Q Consensus 163 IvlYEl~ 169 (268)
.++.-+.
T Consensus 150 ~~ls~~~ 156 (161)
T 1v6z_A 150 ALLALCT 156 (161)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
T ss_conf 9999999
No 22
>>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A* (A:68-229)
Probab=89.58 E-value=1.4 Score=23.01 Aligned_cols=141 Identities=9% Similarity=0.014 Sum_probs=77.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC--HHH------H----HHH-HHCCCCCCCHHCCCCHHHHH
Q ss_conf 6899942888547999999999719980498088889999--999------9----985-31013444200137789984
Q gi|254780904|r 15 PVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPS--EKA------R----SSS-ANADCVIDSVRVFSNLKEAI 81 (268)
Q Consensus 15 ~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~--~~a------~----~~a-~~a~~~~~~~~~~~~~~~a~ 81 (268)
+.+++.=|+.+.-+--+++-|.-+|++.++.+.-.-.... ... . .++ ......+.......++.+++
T Consensus 6 i~l~~a~~k~~k~~~~il~katELGv~~i~p~~t~rs~~~~~~~~~k~~r~~~i~~eA~kQs~r~~~p~i~~~~~l~~~l 85 (162)
T 2egv_A 6 ITLYQSVTVDLKTMDTIVRQATELGVLTFVPIISERSFQKEEAILKKTEKWKRIVIEAMKQSRRPIPMEIKKPVRLSDLI 85 (162)
T ss_dssp EEEEEECCSSTHHHHHHHHHHHHHTCCEEEEEECTTSCCCHHHHHHHHHHHHHHHHHHHHHHTCCSCCEECCCEEGGGCC
T ss_pred CEEEEEEECHHHHHHHHHHHHHEEEEEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 10278533115579999976311554487215200110000456667999999999998533863111023445699998
Q ss_pred HCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHH
Q ss_conf 12553101201122343034124203566655311588169999458884243100012322204767873410168899
Q gi|254780904|r 82 ADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAV 161 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~Av 161 (268)
........ ...... ...........+++.+++|+|+ |.|.+|++.....=..|.+=.-..|=...|+
T Consensus 86 ~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~i~i~IGPEG-Gfs~~Ei~~~~~~g~~~v~LG~~ILR~ETA~ 152 (162)
T 2egv_A 86 PESEENII-----------LDNFYE-GVKPKDVNLEAKTYSVVVGPEG-GFSKRESQILREKGFKSVLLEPYTLRTETAV 152 (162)
T ss_dssp CCSSEEEE-----------ECTTSC-CBCGGGSCTTCSEEEEEECCTT-CCCHHHHHHHHHTTCEEECCSSSCCCHHHHH
T ss_pred HHCCCHHE-----------EHHHHH-HCCCCCCCCCCCCCEEEEECCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHHHH
T ss_conf 63340010-----------012322-0243100224666099993899-9999999999987988976699825277599
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780904|r 162 LLMVWEC 168 (268)
Q Consensus 162 aIvlYEl 168 (268)
...+.-+
T Consensus 153 i~als~i 159 (162)
T 2egv_A 153 VSIVSIL 159 (162)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999998
No 23
>>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} (A:174-332)
Probab=87.82 E-value=1.8 Score=22.27 Aligned_cols=79 Identities=11% Similarity=0.222 Sum_probs=59.2
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547999999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|++++--...=+=|.+.++.-||+ ++.++.|....+.+.....+.. +...-....+..++++++++.+.+..+.
T Consensus 2 ~glkia~vGD~~~rv~~Sl~~~~~~~g~-~~~l~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDviyt~~ 80 (159)
T 2w37_A 2 QGLTLTFMGDGRNNVANSLLVTGAILGV-NIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDV 80 (159)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHHTC-EEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHCCC-EEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEEEECC
T ss_conf 4444022036765654239999863698-899823423378589988876655337986999838999965799999745
Q ss_pred C
Q ss_conf 1
Q gi|254780904|r 92 A 92 (268)
Q Consensus 92 ~ 92 (268)
-
T Consensus 81 w 81 (159)
T 2w37_A 81 W 81 (159)
T ss_dssp S
T ss_pred E
T ss_conf 5
No 24
>>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} (A:153-280)
Probab=87.51 E-value=1.6 Score=22.71 Aligned_cols=78 Identities=19% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCEEEEECCCCCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 9689994288854799-9999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 14 GPVIILVDPQLGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
+..|.+|+ +.+|++ |.++++..||+ +++++.|....+.+.....+.. +...-.....+.++++++.+++.+..+.
T Consensus 3 g~kia~vG--d~~rv~~Sl~~~ls~~g~-~~~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~eai~~aDviyt~~ 79 (128)
T 1pvv_A 3 GVKVVYVG--DGNNVAHSLMIAGTKLGA-DVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 79 (128)
T ss_dssp TCEEEEES--CCCHHHHHHHHHHHHTTC-EEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CCEEEEEC--CCCCCHHHHHHHHHHHCC-CEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEHH
T ss_conf 75799977--887526779999997157-689988986578789999999977751984999769999854799994328
Q ss_pred CCC
Q ss_conf 112
Q gi|254780904|r 92 ARN 94 (268)
Q Consensus 92 ~~~ 94 (268)
-..
T Consensus 80 w~~ 82 (128)
T 1pvv_A 80 WAS 82 (128)
T ss_dssp CCC
T ss_pred HHH
T ss_conf 886
No 25
>>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A (A:146-274)
Probab=86.74 E-value=2.1 Score=21.88 Aligned_cols=80 Identities=14% Similarity=0.105 Sum_probs=57.1
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547999999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|..++.-.-.=.-|.++++.-||+ +++++.|....+.+.....+.. +...-.....+.++++++++.+.+..+.
T Consensus 2 ~g~kv~~vGd~~~rv~~S~~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~ 80 (129)
T 2i6u_A 2 RGLRLSYFGDGANNMAHSLLLGGVTAGI-HVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDT 80 (129)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHTTC-EEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC-EEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCEEEEEEC
T ss_conf 8988999679888601468988861693-465147732347768888777777524874289841110135960999721
Q ss_pred CC
Q ss_conf 11
Q gi|254780904|r 92 AR 93 (268)
Q Consensus 92 ~~ 93 (268)
-.
T Consensus 81 w~ 82 (129)
T 2i6u_A 81 WT 82 (129)
T ss_dssp SS
T ss_pred HH
T ss_conf 55
No 26
>>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis; 2.10A {Gloeobacter violaceus pcc 7421} (A:155-282)
Probab=86.54 E-value=1.9 Score=22.20 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=55.0
Q ss_pred CCEEEEECCCCCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 9689994288854799-9999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 14 GPVIILVDPQLGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
+..|.+++ +.+|+. |.++++.-||+ +++++.|....+.+.....+.. +...-.....+.++++++++.+.+..+.
T Consensus 3 g~ki~~vG--d~~~v~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~~ 79 (128)
T 3gd5_A 3 GLKLAYVG--DGNNVAHSLLLGCAKVGM-SIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 79 (128)
T ss_dssp TCEEEEES--CCCHHHHHHHHHHHHHTC-EEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCEEEEEC--CCHHHHHHHHHHHHHCCC-CEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEHHH
T ss_conf 97699964--630266799999985598-638840234688788999987655315871133578999971676000135
Q ss_pred C
Q ss_conf 1
Q gi|254780904|r 92 A 92 (268)
Q Consensus 92 ~ 92 (268)
-
T Consensus 80 w 80 (128)
T 3gd5_A 80 W 80 (128)
T ss_dssp C
T ss_pred H
T ss_conf 6
No 27
>>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} (A:153-276)
Probab=85.69 E-value=2.4 Score=21.55 Aligned_cols=76 Identities=18% Similarity=0.174 Sum_probs=55.8
Q ss_pred CCCEEEEECCCCCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 89689994288854799-99999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++..|..+.--..+|+. |.++++.-||+ +++++.|....+++.....+..... ...++.++++++++.+.+...+
T Consensus 2 ~glkia~vGd~~~~rv~~Sl~~~~~~~g~-~~~~~~P~~~~~~~~~~~~~~~~g~---~~~~~~d~~ea~~~aDvvy~~~ 77 (124)
T 1ml4_A 2 DGLKIGLLGDLKYGRTVHSLAEALTFYDV-ELYLISPELLRMPRHIVEELREKGM---KVVETTTLEDVIGKLDVLYVTR 77 (124)
T ss_dssp SSEEEEEESCTTTCHHHHHHHHHGGGSCE-EEEEECCGGGCCCHHHHHHHHHTTC---CEEEESCTHHHHTTCSEEEECC
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHCCC-CEEEECCHHHCCCHHHHHHHHHCCC---CEEECCCHHHHHCCCCEEECCE
T ss_conf 46766520686412338879999997899-1999796365387999999997198---2121289899630575121220
Q ss_pred C
Q ss_conf 1
Q gi|254780904|r 92 A 92 (268)
Q Consensus 92 ~ 92 (268)
-
T Consensus 78 w 78 (124)
T 1ml4_A 78 I 78 (124)
T ss_dssp C
T ss_pred E
T ss_conf 0
No 28
>>2rgw_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, pyrimidine biosynthesis, thermostability; 2.80A {Methanococcus jannaschii} PDB: 3e2p_A (A:148-281)
Probab=84.65 E-value=1.9 Score=22.18 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=54.6
Q ss_pred CCCEEEEECCCCCCHH-HHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEE
Q ss_conf 8968999428885479-9999999971-9980498088889999999998531013444200137789984125531012
Q gi|254780904|r 13 KGPVIILVDPQLGENI-GMVARAMWNF-NLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYAT 90 (268)
Q Consensus 13 ~~~~vVLv~p~~p~Ni-GaiaRa~~~f-G~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~ 90 (268)
++..|..++--..+++ =|.+.++.-| |+ +++++.|....+.+.....+..... ...++.++++++.+.+.+...
T Consensus 3 ~glkia~iGd~~~~rv~~S~~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~g~---~i~~~~d~~ea~~~aDviy~~ 78 (134)
T 2rgw_A 3 DGIKIAFVGDLKYGRTVHSLVYALSLFENV-EMYFVSPKELRLPKDIIEDLKAKNI---KFYEKESLDDLDDDIDVLYVT 78 (134)
T ss_dssp SSCEEEEESCTTTCHHHHHHHHHHTTSSSC-EEEEECCGGGCCCHHHHHHHHHTTC---CEEEESSGGGCCTTCSEEEEC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCE-EEEEECCCCCCCCHHHHCCCCCCCC---CCCCCHHHHHHCCCCEEEEEC
T ss_conf 577699970554332568889986505743-7999657545785232101001222---211120012202131699501
Q ss_pred EC
Q ss_conf 01
Q gi|254780904|r 91 TA 92 (268)
Q Consensus 91 ~~ 92 (268)
.-
T Consensus 79 ~w 80 (134)
T 2rgw_A 79 RI 80 (134)
T ss_dssp CC
T ss_pred CE
T ss_conf 35
No 29
>>1e8c_A UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; peptidoglycan biosynthesis; HET: KCX UAG API; 2.0A {Escherichia coli} (A:338-498)
Probab=84.63 E-value=1.8 Score=22.36 Aligned_cols=119 Identities=10% Similarity=0.030 Sum_probs=62.7
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEC-CCCCCCCCHHHHHH---HHHCCCCCCCH---HCCCCHHHH
Q ss_conf 321348968999428885479999999997199804980-88889999999998---53101344420---013778998
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLV-NPRDGWPSEKARSS---SANADCVIDSV---RVFSNLKEA 80 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv-~P~~~~~~~~a~~~---a~~a~~~~~~~---~~~~~~~~a 80 (268)
.....++|.||+|.-.+|.-+-+.+.++..|+..++++| ++..+......... +....+.+... .......+.
T Consensus 7 ~i~~~~~~~ii~D~AHNp~~~~al~~~l~~~~~~ri~~v~~~~~dk~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~ 86 (161)
T 1e8c_A 7 VFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLXGAIAEEFADVAVVTDDNPRTEEPRAI 86 (161)
T ss_dssp EECCTTSCEEEEECCCSHHHHHHHHHHHHHTCSSCEEEEECCCSSSCSTHHHHHHHHHHHHCSEEEECCSCCBTSCHHHH
T ss_pred EEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH
T ss_conf 99957981999986899999999999987447998899997188777338899999998669799999888665798999
Q ss_pred HHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 412553101201122343034124203566655311588169999458884
Q gi|254780904|r 81 IADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWG 131 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~G 131 (268)
...... ...........................+.+.||+|+-.-+
T Consensus 87 ~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~~~~~~~d~ilv~GS~~~~ 132 (161)
T 1e8c_A 87 INDILA-----GXLDAGHAKVXEGRAEAVTCAVXQAKENDVVLVAGKGHED 132 (161)
T ss_dssp HHHHHT-----TSSCGGGSEECSCHHHHHHHHHHHSCTTCEEEEESCTTCC
T ss_pred HHHHHH-----CCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 999985-----3868888899899999999999838998999994788888
No 30
>>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} (A:146-268)
Probab=80.97 E-value=2.5 Score=21.41 Aligned_cols=75 Identities=19% Similarity=0.195 Sum_probs=58.0
Q ss_pred CCCEEEEECCCCCCH-HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 896899942888547-9999999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGEN-IGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~N-iGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
.+..|.++.--..++ +=|.++++.-||++ +.++.|....++++.+....++ ....+.++++++++.+.+..++
T Consensus 3 ~g~kia~vGD~~~~rv~~Sl~~~l~~~g~~-v~~~~p~~~~~~~~~~~~~~~~-----~~~~~~d~~ea~~~aDvvy~~~ 76 (123)
T 1pg5_A 3 DGLVFALLGDLKYARTVNSLLRILTRFRPK-LVYLISPQLLRARKEILDELNY-----PVKEVENPFEVINEVDVLYVTR 76 (123)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHGGGSCCS-EEEEECCGGGCCCHHHHTTCCS-----CEEEESCGGGTGGGCSEEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCC-EEECCCHHHCCCHHHHHHHHCC-----CCCCCCCHHHHHCCCCEEEEEC
T ss_conf 566589972687204675699999873996-4642673640651777765256-----4222468888724553576403
Q ss_pred CC
Q ss_conf 11
Q gi|254780904|r 92 AR 93 (268)
Q Consensus 92 ~~ 93 (268)
-.
T Consensus 77 ~~ 78 (123)
T 1pg5_A 77 IQ 78 (123)
T ss_dssp CC
T ss_pred CC
T ss_conf 44
No 31
>>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} (A:153-280)
Probab=80.77 E-value=2 Score=22.01 Aligned_cols=77 Identities=16% Similarity=0.158 Sum_probs=55.2
Q ss_pred CCEEEEECCCCCCHH-HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 968999428885479-99999999719980498088889999999998531-0134442001377899841255310120
Q gi|254780904|r 14 GPVIILVDPQLGENI-GMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 14 ~~~vVLv~p~~p~Ni-GaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
+..|.+++. ..|+ -|.+.++.-||+ +++++.|....+.+.....+.. +...-.....+.++++++.+.+.+...+
T Consensus 3 gl~i~~vGd--~~nv~~Sl~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~eai~~aDvvyt~~ 79 (128)
T 1oth_A 3 GLTLSWIGD--GNNILHSIMMSAAKFGM-HLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 79 (128)
T ss_dssp TCEEEEESC--SSHHHHHHHTTTGGGTC-EEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCEEEEECC--CCCCCCCHHHHHHHCCC-CEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEEEE
T ss_conf 967999656--55651319999876287-378983577687488999999999864997999728899850799799985
Q ss_pred CC
Q ss_conf 11
Q gi|254780904|r 92 AR 93 (268)
Q Consensus 92 ~~ 93 (268)
-.
T Consensus 80 w~ 81 (128)
T 1oth_A 80 WI 81 (128)
T ss_dssp SS
T ss_pred EE
T ss_conf 46
No 32
>>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli K12} (A:152-285)
Probab=80.07 E-value=4 Score=20.17 Aligned_cols=76 Identities=13% Similarity=0.242 Sum_probs=54.0
Q ss_pred CCCEEEEECC-CCCCHHHHHHHHHHHC-CCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEE
Q ss_conf 8968999428-8854799999999971-9980498088889999999998531013444200137789984125531012
Q gi|254780904|r 13 KGPVIILVDP-QLGENIGMVARAMWNF-NLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYAT 90 (268)
Q Consensus 13 ~~~~vVLv~p-~~p~NiGaiaRa~~~f-G~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~ 90 (268)
++..|..++- .+..=.-|.++++.-| |+ +++++.|....+.+.....+..... ...++.++++++.+++.+...
T Consensus 2 ~g~~i~~vGD~~~~rv~~Sl~~~~~~l~g~-~v~l~~P~~~~~~~~~~~~~~~~g~---~i~~~~d~~~a~~~aDviyt~ 77 (134)
T 3csu_A 2 DNLHVAMVGDLKYGRTVHSLTQALAKFDGN-RFYFIAPDALAMPQYILDMLDEKGI---AWSLHSSIEEVMAEVDILYMT 77 (134)
T ss_dssp SSCEEEEESCTTTCHHHHHHHHHHHTSSSC-EEEEECCGGGCCCHHHHHHHHHTTC---CEEECSCGGGTTTTCSEEEEC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCC-EEEEECCCCCCCCHHHHHHHHCCCC---CCCCCCCHHHCCCCCCEEEEC
T ss_conf 687589995376673389999998635677-6999698612541343200100124---333211033215677545311
Q ss_pred EC
Q ss_conf 01
Q gi|254780904|r 91 TA 92 (268)
Q Consensus 91 ~~ 92 (268)
.-
T Consensus 78 ~w 79 (134)
T 3csu_A 78 RV 79 (134)
T ss_dssp C-
T ss_pred CC
T ss_conf 43
No 33
>>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis} (A:158-292)
Probab=78.95 E-value=4.3 Score=19.94 Aligned_cols=79 Identities=11% Similarity=0.183 Sum_probs=52.3
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCC--CCCHHHHHHHHH---CCCCCCCHHCCCCHHHHHHCCCCC
Q ss_conf 896899942888547999999999719980498088889--999999998531---013444200137789984125531
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDG--WPSEKARSSSAN---ADCVIDSVRVFSNLKEAIADLHFI 87 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~--~~~~~a~~~a~~---a~~~~~~~~~~~~~~~a~~~~~~~ 87 (268)
++..|.+++.--..=.-|.++++.-||+ +++++.|... +++.+....+.. ....-....++.++.+++.+.+.+
T Consensus 3 ~glkia~vGd~~~rv~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvi 81 (135)
T 3grf_A 3 KGIKFAYCGDSMNNVTYDLMRGCALLGM-ECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVV 81 (135)
T ss_dssp GGCCEEEESCCSSHHHHHHHHHHHHHTC-EEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC-EEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHCCCCEE
T ss_conf 5724887268765537799999997799-699965653456766999999999877523698499995799985479989
Q ss_pred EEEEC
Q ss_conf 01201
Q gi|254780904|r 88 YATTA 92 (268)
Q Consensus 88 ~~~~~ 92 (268)
....-
T Consensus 82 yt~~w 86 (135)
T 3grf_A 82 YTDSW 86 (135)
T ss_dssp EECCC
T ss_pred EECHH
T ss_conf 85113
No 34
>>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* (A:125-318)
Probab=77.83 E-value=3 Score=20.95 Aligned_cols=67 Identities=9% Similarity=0.052 Sum_probs=48.4
Q ss_pred CCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 8547999-9999997199804980888899999999985310134442001377899841255310120112
Q gi|254780904|r 24 LGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARN 94 (268)
Q Consensus 24 ~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 94 (268)
.-||+|. +||.++.||+. ++.++++ +.+.......++...........++++++..++.++......
T Consensus 51 G~G~iG~~~a~~l~~~G~~-V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDivi~~~p~t 118 (194)
T 2vhw_A 51 GAGTAGYNAARIANGMGAT-VTVLDIN---IDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVP 118 (194)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEEESC---HHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CCCCHHHHHHHHHHCCCCC-CCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECC
T ss_conf 4662114778975146652-2212333---111111100136512344446666543222332122102237
No 35
>>2yy8_A ATRM56, UPF0106 protein PH0461; DEEP trefoil knot, structural genomics, NPPSFA; HET: SAM MTA; 2.48A {Pyrococcus horikoshii} (A:)
Probab=77.72 E-value=4.7 Score=19.72 Aligned_cols=124 Identities=16% Similarity=0.198 Sum_probs=69.3
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCHHHHH------HHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCCCCCEEEEC
Q ss_conf 999999971998049808888999999999------85310134442001377899841255310120112234303412
Q gi|254780904|r 30 MVARAMWNFNLTQLRLVNPRDGWPSEKARS------SSANADCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLA 103 (268)
Q Consensus 30 aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~------~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 103 (268)
-++=++-+||.+.++|.... ++.+.. ..-|+.+.+. ...++...++...-.+.- .+-.-..
T Consensus 20 HV~LtARAfGA~~iil~~e~----D~~v~esv~dV~~rwGG~F~ie---~~~~w~~~ik~~kG~VVH------LTMYG~~ 86 (201)
T 2yy8_A 20 HVALTARAFGADGIIIASEE----DEKVKESVEDVVKRWGGPFFIE---FNRNWRKVMKEFTGVKVH------LTMYGLH 86 (201)
T ss_dssp HHHHHHHHTTCSEEEESSSC----CHHHHHHHHHHHHHHCSCCBCC---BCSCHHHHHHHCCSEEEE------EEEEEEE
T ss_pred HHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHHHHCCCCEEEE---ECCCHHHHHHHCCCEEEE------EEECCCC
T ss_conf 88899987268758974787----7258889999998519966999---745889999854997999------9745875
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 420356665531158816999945888424310001232220476787341016889999999999962
Q gi|254780904|r 104 PKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENS 172 (268)
Q Consensus 104 ~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r~~ 172 (268)
..+....+......+.++.+|.|.|. .+.+.-+++|+-++|-..|.-++ .|.||+|-.++...
T Consensus 87 i~dvi~~Ir~~~~~~~~ilvVVGaeK--VP~evYelADyNVaVgnQPHSEV----AALAiFLDrl~~G~ 149 (201)
T 2yy8_A 87 VDDVIEELKEKLKKGEDFMIIVGAEK--VPREVYELADYNVAIGNQPHSEV----AALAVLLDRLLEGK 149 (201)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSC--CCHHHHHHCSEEEESSSSCCCHH----HHHHHHHHHHTTTG
T ss_pred CHHHHHHHHHHCCCCCCEEEEECCCC--CCHHHHHHCCCCEEECCCCCHHH----HHHHHHHHHHHCCC
T ss_conf 11567888763345897899988885--99899843564255278870899----99999999870771
No 36
>>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277} (A:75-257)
Probab=75.40 E-value=5.4 Score=19.32 Aligned_cols=142 Identities=15% Similarity=0.097 Sum_probs=74.9
Q ss_pred CCCCCCHHHHHHHHHHHCCCCEEEECCCCCC---CCC-H---H-HHHHH-HHCCCCCCCHHCCCCHHHHHHCCCCCEE--
Q ss_conf 2888547999999999719980498088889---999-9---9-99985-3101344420013778998412553101--
Q gi|254780904|r 21 DPQLGENIGMVARAMWNFNLTQLRLVNPRDG---WPS-E---K-ARSSS-ANADCVIDSVRVFSNLKEAIADLHFIYA-- 89 (268)
Q Consensus 21 ~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~---~~~-~---~-a~~~a-~~a~~~~~~~~~~~~~~~a~~~~~~~~~-- 89 (268)
-|+...-+=.+++-|.-.|++.++++.-.-. ... + + +..++ ......+..+....++.+++........
T Consensus 11 ~pK~~~r~d~il~k~tELGV~~i~p~~s~rs~~~~~k~~r~~~ii~ea~kQs~r~~~P~I~~~~~~~~~l~~~~~~~~~~ 90 (183)
T 3kw2_A 11 PTKQSERXEWXLEKLVEIGVDEVVFIESEHSERRRIKAERLERIAISAXKQSLKASFPVIRVNIPIQTVIADTPKAAVRL 90 (183)
T ss_dssp CCSSHHHHHHHHHHHHHHCCSEEEEEECTTSCCSCCCHHHHHHHHHHHHHHTTCSBCCEEEEEEEHHHHHHHSCTTSEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCCCCCC
T ss_conf 23441179999999881184489953035402444457789999999999737663867735658899997371025322
Q ss_pred EECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 20112234303412420356665531158816999945888424310001232220476787341016889999999
Q gi|254780904|r 90 TTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVW 166 (268)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlY 166 (268)
............... ...........+++.+++|+|+ |.|.+|++.....=..|.+=.-..|=.-.|+...+-
T Consensus 91 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~i~VGPEG-Gfs~~E~~~l~~~gf~~vsLG~rILR~ETA~i~als 163 (183)
T 3kw2_A 91 IAYVDEAVRAEITQG---RGYPSDFYHVGQDVLILIGPEG-DFSPSEVESALLAGFAPVSLGESRLRTETAGLVACQ 163 (183)
T ss_dssp EECCCTTCC-----C---CCCGGGTCCTTSCEEEEECCTT-CCCHHHHHHHHHHTCEEECCCSSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH---CCCCHHHHCCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 010133101234431---0242124236882799988998-999999999998799898679981567859999999
No 37
>>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc; HET: FLC; 2.30A {Aquifex aeolicus} (B:125-271)
Probab=75.25 E-value=5.5 Score=19.30 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=58.5
Q ss_pred HHHCCCCCCEEEEECCCCCCHH-HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCC
Q ss_conf 5321348968999428885479-999999997199804980888899999999985310134442001377899841255
Q gi|254780904|r 7 QLQNSAKGPVIILVDPQLGENI-GMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLH 85 (268)
Q Consensus 7 ~l~~~~~~~~vVLv~p~~p~Ni-GaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~ 85 (268)
+....-++..|.++.--.++|+ -|.++++.-||+ +++++.|....+. ......+.++.++++++++.+
T Consensus 15 e~~g~l~gl~ia~vGd~~~~~v~~S~~~~~~~~g~-~v~~~~P~~~~~~----------~~~~~~~~~~~d~~ea~~~aD 83 (147)
T 3d6n_B 15 EHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGA-KIGVCGPKTLIPR----------DVEVFKVDVFDDVDKGIDWAD 83 (147)
T ss_dssp HHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTC-EEEEESCGGGSCT----------TGGGGCEEEESSHHHHHHHCS
T ss_pred HHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCC-EEEEECCHHHCCC----------CHHHCCEEEECCHHHHHHHCC
T ss_conf 98297545248998278877899999999986698-8999896143746----------530277489779999986589
Q ss_pred CCEEEECC
Q ss_conf 31012011
Q gi|254780904|r 86 FIYATTAR 93 (268)
Q Consensus 86 ~~~~~~~~ 93 (268)
.+...+-.
T Consensus 84 vvy~~~w~ 91 (147)
T 3d6n_B 84 VVIWLRLQ 91 (147)
T ss_dssp EEEECCCC
T ss_pred EEEEECCC
T ss_conf 99980443
No 38
>>2wtz_A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate- -2,6-diaminopimelate ligase; nucleotide-binding, peptidoglycan synthesis, MURE, cytoplasm; HET: KCX UAG; 3.00A {Mycobacterium tuberculosis} (A:369-535)
Probab=72.90 E-value=6.2 Score=18.94 Aligned_cols=123 Identities=9% Similarity=-0.013 Sum_probs=65.1
Q ss_pred HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHH---HHHHHHHCCCCCCCHHC---CCCHHHH
Q ss_conf 53213489689994288854799999999971998049808888999999---99985310134442001---3778998
Q gi|254780904|r 7 QLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEK---ARSSSANADCVIDSVRV---FSNLKEA 80 (268)
Q Consensus 7 ~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~---a~~~a~~a~~~~~~~~~---~~~~~~a 80 (268)
+......++.||+|.-.+|.-+-+++.++..++-.-+.+..+..+..... ..+.+....+.+..... .......
T Consensus 11 e~i~~~~~~~ii~D~aHNp~s~~a~l~~l~~~~~~~~~v~g~~~dk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (167)
T 2wtz_A 11 EQIDRGQGFLALVDYAHKPEALRSVLTTLAHPDRRLAVVFGAGGDRDPGKRAPMGRIAAQLADLVVVTDDNPRDEDPTAI 90 (167)
T ss_dssp EECCSSCSSEEEEECCCSHHHHHHHHHTTCCSSSCEEEEECCCTTSCGGGHHHHHHHHHHHCSEEEECCSCCTTSCHHHH
T ss_pred EEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH
T ss_conf 99973262289874589909999999998443788759976677885778999999999629999989877675798999
Q ss_pred HHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 412553101201122343034124203566655311588169999458884
Q gi|254780904|r 81 IADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWG 131 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~G 131 (268)
..... ...............................+.+.||.|+=..+
T Consensus 91 ~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~d~iLv~GS~~~~ 139 (167)
T 2wtz_A 91 RREIL--AGAAEVGGDAQVVEIADRRDAIRHAVAWARPGDVVLIAGKGHET 139 (167)
T ss_dssp HHHHH--HHHTTCC-CCEEEECCSHHHHHHHHHHHCCTTCEEEEESCTTCC
T ss_pred HHHHH--HHHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 99999--87897479988899499999999999848999999984788886
No 39
>>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 2g6a_A* 2g65_A* 2g6c_A* 2g68_A* (A:188-324)
Probab=72.72 E-value=6.3 Score=18.91 Aligned_cols=83 Identities=12% Similarity=-0.037 Sum_probs=53.5
Q ss_pred CCCCEEEEECC-CCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEE
Q ss_conf 48968999428-88547999999999719980498088889999999998531-01344420013778998412553101
Q gi|254780904|r 12 AKGPVIILVDP-QLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYA 89 (268)
Q Consensus 12 ~~~~~vVLv~p-~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~ 89 (268)
..+..|.++.= .+-.=+-|.++++.-||++-.++.-|....+++.....+.. +...-....++.++++++.+.+.++.
T Consensus 5 l~gl~ia~vGD~~~~rv~~Sl~~~~~~~g~~~~~~~pp~~~~p~~~~~~~a~~~~~~~g~~i~~~~d~~eav~~aDviy~ 84 (137)
T 1zq6_A 5 KYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYA 84 (137)
T ss_dssp EEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEE
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEE
T ss_conf 47898510477433389988889877415624784476235778899998877777615761897177787248779996
Q ss_pred EECCC
Q ss_conf 20112
Q gi|254780904|r 90 TTARN 94 (268)
Q Consensus 90 ~~~~~ 94 (268)
+.-..
T Consensus 85 ~~wq~ 89 (137)
T 1zq6_A 85 KSWGA 89 (137)
T ss_dssp ECCCC
T ss_pred EEEEE
T ss_conf 40675
No 40
>>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} (A:124-315)
Probab=72.64 E-value=5.7 Score=19.18 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=42.5
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEEC
Q ss_conf 854799-999999971998049808888999999999853101344420013778998412553101201
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTA 92 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 92 (268)
.-|+|| .+||.+++||.. ++.++|. +.........++.........+..+++++..++.++....
T Consensus 51 G~G~iG~~~a~~l~~~G~~-V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDivi~~~~ 116 (192)
T 1pjc_A 51 GGGVVGTEAAKMAVGLGAQ-VQIFDIN---VERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL 116 (192)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEEESC---HHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred CCCHHHHHHHHHHHHCCCE-EEEECCC---HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHEEEEEC
T ss_conf 5740234788999864986-9997275---8889999985075213446667778876520320342100
No 41
>>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} (A:78-268)
Probab=72.58 E-value=6.3 Score=18.89 Aligned_cols=149 Identities=12% Similarity=0.103 Sum_probs=79.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC----------H----HHHHHH-HHCCCCCCCHHCCCCHHHH
Q ss_conf 899942888547999999999719980498088889999----------9----999985-3101344420013778998
Q gi|254780904|r 16 VIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPS----------E----KARSSS-ANADCVIDSVRVFSNLKEA 80 (268)
Q Consensus 16 ~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~----------~----~a~~~a-~~a~~~~~~~~~~~~~~~a 80 (268)
+.++.-+--+.-+--+++-|.-+|++.++.+.-.-.... + .+..++ ......+..+....++.++
T Consensus 6 i~L~~a~~K~~~~d~il~katELGV~~i~p~~serS~~~~~~~~~~~k~er~~~i~~eA~kQs~r~~lP~I~~~~~l~~~ 85 (191)
T 1vhk_A 6 VYIASGLPKGDKLEWIIQKGTELGAHAFIPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYRNEVPRVXDVHSFQQL 85 (191)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHTTCCEEEEECCTTCCCC---------HHHHHHHHHHHHHHTTCSSCCEECCCBCHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 68875013331178999742105545899863145522013311677899999999999985188731332135789999
Q ss_pred HHCCCCCEEEECC-CCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHH
Q ss_conf 4125531012011-223430341242035666553115881699994588842431000123222047678734101688
Q gi|254780904|r 81 IADLHFIYATTAR-NRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQ 159 (268)
Q Consensus 81 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~ 159 (268)
+............ ...... ................++++++.|+|+ |.|.+|++.....=-.|.+=.-..|=...
T Consensus 86 l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~i~IGPEG-Gfs~~E~~~l~~~gf~~vsLG~rILR~ET 161 (191)
T 1vhk_A 86 LQRXQDFDKCVVAYEESSKQ---GEISAFSAIVSSLPKGSSLLIVFGPEG-GLTEAEVERLTEQDGVTCGLGPRILRTET 161 (191)
T ss_dssp HHHGGGSSEEEEECC-----------CHHHHHHHTCCTTCEEEEEECCTT-CCCHHHHHHHHHTTCEEECCCSSCCCTTT
T ss_pred HHHCCCCCEEEEEECCCCCC---CCHHHHHHHHHHHCCCCEEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHH
T ss_conf 87432443399960222233---314678887764247981899983898-89999999999889999778998246775
Q ss_pred ----HHHHHHHHH
Q ss_conf ----999999999
Q gi|254780904|r 160 ----AVLLMVWEC 168 (268)
Q Consensus 160 ----AvaIvlYEl 168 (268)
|++++.|.+
T Consensus 162 A~i~als~i~~~~ 174 (191)
T 1vhk_A 162 APLYALSAISYQT 174 (191)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999988
No 42
>>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} (A:187-318)
Probab=71.25 E-value=6.8 Score=18.70 Aligned_cols=117 Identities=12% Similarity=0.077 Sum_probs=66.3
Q ss_pred CCCCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCH-------HHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 888547999-9999997199804980888899999-------99998531013444200137789984125531012011
Q gi|254780904|r 22 PQLGENIGM-VARAMWNFNLTQLRLVNPRDGWPSE-------KARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 22 p~~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~-------~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.+..||+|. +||.+..+|...+++++......+. ........ -..........+....++.++..+..
T Consensus 7 v~G~G~vG~~~a~~l~~~Ga~~V~v~D~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~adi~~~~a~~ 82 (132)
T 2a9f_A 7 VNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKV----TNREFKSGTLEDALEGADIFIGVSAP 82 (132)
T ss_dssp EECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHH----HSCTTCCCSCSHHHHTTCSEEECCST
T ss_pred EEECCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH----HHCCCCCCCHHHHHHCCCEEEECCCC
T ss_conf 76076101057665776366764012240001047511166989988876----54144547599985057557752678
Q ss_pred CCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 2234303412420356665531158816999945888424310001232220476787341
Q gi|254780904|r 94 NRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPS 154 (268)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~S 154 (268)
.....+..... ..+.+.+-.++...+...++.-.-...+.++-.++|||
T Consensus 83 -----------~~i~~e~i~~m-k~~~vi~~~an~~~~~~~d~~~~~~~~vv~~G~~~~P~ 131 (132)
T 2a9f_A 83 -----------GVLKAEWISKM-AARPVIFAMANPIPEIYPDEALEAGAYIVGTGRSDFPN 131 (132)
T ss_dssp -----------TCCCHHHHHTS-CSSCEEEECCSSSCSSCHHHHHTTTCSEEEESCTTSSS
T ss_pred -----------CCCCHHHHHHC-CCCCEEEECCCCCCCCHHHHHHCCCCEEECCCCCCCCC
T ss_conf -----------75535678760-78975996689754401666521587587888999888
No 43
>>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus} (A:1-80)
Probab=70.83 E-value=5.6 Score=19.22 Aligned_cols=57 Identities=9% Similarity=0.111 Sum_probs=36.9
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 854799-99999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
.-|||| +++|.+..||++ ++..+|... ..+...+. ....+.++++..+.|+.+....
T Consensus 8 G~G~iG~~va~~~~~fG~~-v~~~d~~~~---~~~~~~~~-------~~~~~~~l~~ll~~~Dvv~~~~ 65 (80)
T 2z04_A 8 GGGQLGWXTILEGRKLGFK-FHVLEDKEN---APACRVAD-------RCFRTGQISEFVDSCDIITYEF 65 (80)
T ss_dssp CCSHHHHHHHHHHGGGTCE-EEEECSSSS---CHHHHHSS-------EEECGGGHHHHHHHCSEEEESS
T ss_pred CCCHHHHHHHHHHHHCCCE-EEEEECCCC---CCHHHHCH-------HHCCHHHHHHHHHHCCEEEECC
T ss_conf 7779999999999977998-999956997---97677361-------6507899999996099899862
No 44
>>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} (A:78-257)
Probab=68.23 E-value=7.9 Score=18.30 Aligned_cols=141 Identities=13% Similarity=0.099 Sum_probs=80.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC--C-HH-----------HHHHH-HHCCCCCCCHHCCCCHHHH
Q ss_conf 89994288854799999999971998049808888999--9-99-----------99985-3101344420013778998
Q gi|254780904|r 16 VIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWP--S-EK-----------ARSSS-ANADCVIDSVRVFSNLKEA 80 (268)
Q Consensus 16 ~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~--~-~~-----------a~~~a-~~a~~~~~~~~~~~~~~~a 80 (268)
+.+..-+-.+..+--+++-|.-+|++.++.+.-.-... . +. +..++ ......+.......++.++
T Consensus 5 i~l~~a~~K~~~~~~il~k~tELGv~~i~p~~s~rs~~~~~~~~~~~k~eR~~~i~~eA~kQs~r~~lp~i~~~~~l~~~ 84 (180)
T 1vhy_A 5 IHLGQVISRGERXEFTIQKSVELGVNVITPLWSERCGVKLDAERXDKKIQQWQKIAIAACEQCGRNIVPEIRPLXKLQDW 84 (180)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTCCEEEEEECTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHCCSSCCEECCCEEHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 77776520655199999875243101589998501504353557777588999999999986078644420211001455
Q ss_pred HHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHH
Q ss_conf 41255310120112234303412420356665531158816999945888424310001232220476787341016889
Q gi|254780904|r 81 IADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQA 160 (268)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~A 160 (268)
+............ ...............+++.+++|+|+ |.|.+|++.....=-.|.+=.-..|=.-.|
T Consensus 85 l~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~i~IGPEG-Gfs~~E~~~~~~~g~~~vsLG~~ILR~ETA 153 (180)
T 1vhy_A 85 CAENDGALKLNLH----------PRAHYSIKTLPTIPAGGVRLLIGSEG-GLSAQEIAQTEQQGFTEILLGKRVLRTETA 153 (180)
T ss_dssp HTCCSSCEEEEEC----------TTCCCBGGGCCCCCTTCEEEEECCTT-CCCHHHHHHHHHTTCEEEBCCSSCCCHHHH
T ss_pred HHCCCCCHHHHCC----------CCCCHHHHHHHCCCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHHH
T ss_conf 5303330010002----------10002244431156674589984777-889899999998798886668980667879
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780904|r 161 VLLMVWE 167 (268)
Q Consensus 161 vaIvlYE 167 (268)
+...+.-
T Consensus 154 ~i~als~ 160 (180)
T 1vhy_A 154 SLAAISA 160 (180)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999
No 45
>>2v3j_A Essential for mitotic growth 1; EMG1, rRNA processing, nuclear protein, ribonucleoprotein, ribosome biogenesis; 2.00A {Saccharomyces cerevisiae} (A:)
Probab=66.93 E-value=8.4 Score=18.13 Aligned_cols=62 Identities=11% Similarity=0.060 Sum_probs=49.6
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 665531158816999945888424310001232220476787341016889999999999962136
Q gi|254780904|r 110 VLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVS 175 (268)
Q Consensus 110 ~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r~~~~~ 175 (268)
...........+++++|--..|.+++..+.+|..++|-- -.|.-+.++.++|..++|++.-.
T Consensus 191 efa~~l~~~~~i~~~IGG~~~G~~~~~~~~ad~~iSLS~----~tLsh~lv~~~L~eqlyRa~~Il 252 (258)
T 2v3j_A 191 DYIEKLDDDESICVFVGAXARGKDNFADEYVDEKVGLSN----YPLSASVACSKFCHGAEDAWNIL 252 (258)
T ss_dssp HHHHTSCTTCEEEEEEECSSSCCTTTTTTTCSCEEBSCS----SCCCHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECC----CCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999872436986999933558985521000405899608----76689999999999999985853
No 46
>>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} (X:165-284)
Probab=64.70 E-value=9.2 Score=17.86 Aligned_cols=67 Identities=18% Similarity=0.142 Sum_probs=47.8
Q ss_pred EEEEECCCCCCHH-HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 8999428885479-99999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 16 VIILVDPQLGENI-GMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 16 ~vVLv~p~~p~Ni-GaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.|..+.---+.|+ -|.++++.-||+ ++.++.|....+.+.. ......+.++++++.+.+.+....-.
T Consensus 8 ki~~vGD~~~~~v~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~----------~~~~~~~~d~~~ai~~aDvvyt~~w~ 75 (120)
T 1js1_X 8 TWAPHPRPLPQAVPNSFAEWMNATDY-EFVITHPEGYELDPKF----------VGNARVEYDQMKAFEGADFIYAKNWA 75 (120)
T ss_dssp ECCCCSSCCCSHHHHHHHHHHHTSSS-EEEEECCTTCCCCHHH----------HTTCEEESCHHHHHTTCSEEEECCCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCC-CEEECCCCCCCCCHHH----------CCCCEECCCHHHCCCCCCEEEEEEEE
T ss_conf 99844885305668999999875455-6166047654642000----------13513302233214677579998898
No 47
>>2ef0_A Ornithine carbamoyltransferase; TTHA1199, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Thermus thermophilus HB8} (A:152-270)
Probab=58.95 E-value=12 Score=17.22 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=50.2
Q ss_pred CCEEEEECCCCCCHH-HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEEC
Q ss_conf 968999428885479-9999999971998049808888999999999853101344420013778998412553101201
Q gi|254780904|r 14 GPVIILVDPQLGENI-GMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTA 92 (268)
Q Consensus 14 ~~~vVLv~p~~p~Ni-GaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 92 (268)
+..|.++. +.+|+ -|.+++|.-||+ +++++.|....+.+.....+ ...++.++++++.+.+.+....-
T Consensus 3 glkv~~vG--d~~~v~~S~~~~~~~~g~-~v~~~~P~~~~~~~~~~~g~--------~v~~~~d~~~a~~~aDvvy~~~w 71 (119)
T 2ef0_A 3 GLEVAWVG--DGNNVLNSLLEVAPLAGL-KVRVATPKGYEPDPGLLKRA--------NAFFTHDPKEAALGAHALYTDVW 71 (119)
T ss_dssp TCEEEEES--CCCHHHHHHHHHHHHHTC-EEEEECCTTCCCCHHHHHHH--------TCEEESCHHHHHTTCSEEEECCC
T ss_pred CCEEEEEE--CCCCCHHHHHHHHHHCCC-CEEEECCCHHHHHHHHCCCC--------CCCCCCCHHHHHCCCCEEEEEEH
T ss_conf 86046651--334408878767764497-42452252044421111134--------55423678886458886887428
Q ss_pred C
Q ss_conf 1
Q gi|254780904|r 93 R 93 (268)
Q Consensus 93 ~ 93 (268)
.
T Consensus 72 ~ 72 (119)
T 2ef0_A 72 T 72 (119)
T ss_dssp C
T ss_pred H
T ss_conf 7
No 48
>>2eez_A Alanine dehydrogenase; TTHA0216, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.71A {Thermus thermophilus HB8} (A:123-315)
Probab=58.81 E-value=10 Score=17.64 Aligned_cols=73 Identities=10% Similarity=0.179 Sum_probs=45.5
Q ss_pred CCEEEEECCCCCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEEC
Q ss_conf 96899942888547999-99999971998049808888999999999853101344420013778998412553101201
Q gi|254780904|r 14 GPVIILVDPQLGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTA 92 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 92 (268)
+-.|.++ .-|++|. +||.++.||+. +++.++. +.+..................+..+++.++.++.++....
T Consensus 44 g~~v~ii---G~G~iG~~~a~~l~~~G~~-V~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDivi~~~~ 116 (193)
T 2eez_A 44 PASVVIL---GGGTVGTNAAKIALGMGAQ-VTILDVN---HKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVL 116 (193)
T ss_dssp CCEEEEE---CCSHHHHHHHHHHHHTTCE-EEEEESC---HHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCEEEC---CCCCHHHHHHHHHHHCCCE-EEECCCH---HHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHEEEEEEE
T ss_conf 4300120---4773247899999757987-8963622---8888777764144200012106778877533310465333
Q ss_pred C
Q ss_conf 1
Q gi|254780904|r 93 R 93 (268)
Q Consensus 93 ~ 93 (268)
.
T Consensus 117 ~ 117 (193)
T 2eez_A 117 V 117 (193)
T ss_dssp -
T ss_pred C
T ss_conf 2
No 49
>>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE TAR; 2.10A {Bacillus halodurans} (A:1-125,A:270-293)
Probab=48.37 E-value=16 Score=16.31 Aligned_cols=50 Identities=12% Similarity=-0.004 Sum_probs=31.9
Q ss_pred HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 9999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 30 MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 30 aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
-+||++..+|. +++++.|....+ .......+.++++++.+++.++.=.-.
T Consensus 19 ~vArsL~~~Ga-~V~~~G~~~~~~-------------~~~gv~~~~~~~eal~~aDvvILpvp~ 68 (149)
T 3d4o_A 19 EIIRKLSTFDA-KISLVGFDQLDD-------------GFIGVTKXRIDEVDWNTVDAILLPISG 68 (149)
T ss_dssp HHHHHHHHTTC-EEEEESCTTCC---------------CTTCEEECGGGCCGGGCSEEECCTTC
T ss_pred HHHHHHHHCCC-EEEEEECCCCCC-------------CCCCEEEECCHHHHHHCCCEEEECCCC
T ss_conf 99999997899-899996676434-------------557725626876787379999946866
No 50
>>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAP; 2.79A {Bacillus subtilis} (A:1-127,A:272-300)
Probab=44.28 E-value=20 Score=15.76 Aligned_cols=55 Identities=7% Similarity=-0.099 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 799999999971998049808888999999999853101344420013778998412553101201122
Q gi|254780904|r 27 NIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARNR 95 (268)
Q Consensus 27 NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 95 (268)
+=+-++|+...+|+ +++++.|...-+ .......+.++++++.+++.++.-.-..+
T Consensus 18 r~~rva~sL~~~G~-~V~~~gp~~~~~-------------~~~~v~~~~~l~eai~~aDvIilpvq~er 72 (156)
T 2rir_A 18 RQLEIIRKLTEQQA-DIYLVGFDQLDH-------------GFTGAVKCNIDEIPFQQIDSIILPVSATT 72 (156)
T ss_dssp HHHHHHHHHHHTTC-EEEEESCTTSSC-------------CCTTEEECCGGGSCGGGCSEEECCSSCEE
T ss_pred HHHHHHHHHHHCCC-EEEEEECCCHHH-------------HHCCCEECCCHHHHHHHCCEEECCCCCCC
T ss_conf 59999999997899-799996470663-------------50662770677898610888852565558
No 51
>>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} (A:1-151)
Probab=40.93 E-value=22 Score=15.46 Aligned_cols=66 Identities=15% Similarity=0.099 Sum_probs=37.9
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCC-----CCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 854799-9999999719980498088889999999998531013-----444200137789984125531012011
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADC-----VIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~-----~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
..|++| +++-+++..|+.++++++.. .+++-....+... ............+++++++.++.+...
T Consensus 11 GaG~vG~~~a~~la~~~~~ev~l~Di~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~vi~~~~~ 82 (151)
T 1t2d_A 11 GSGMIGGVMATLIVQKNLGDVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF 82 (151)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEECCC----CCHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHCCEEEEECCCC
T ss_conf 979899999999971899879998799----980277989876636446888679437876666256457643433
No 52
>>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} (A:)
Probab=38.01 E-value=25 Score=15.15 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=43.0
Q ss_pred CEEEEEC-CCCCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEEC
Q ss_conf 6899942-888547999-99999971998049808888999999999853101344420013778998412553101201
Q gi|254780904|r 15 PVIILVD-PQLGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTA 92 (268)
Q Consensus 15 ~~vVLv~-p~~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 92 (268)
-.|+.+. ..+|++.|. +++.+..+|+. .++++|+.. ...+.....|.++.++....+.++....
T Consensus 14 ~siaViGaS~~~~~~g~~v~~~L~~~g~~-~~~~~p~~~-------------~~~i~g~~~~~sl~~~~~~~D~vvi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR-VLPVNPRFQ-------------GEELFGEEAVASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE-EEEECGGGT-------------TSEETTEECBSSGGGCCSCCSEEEECSC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHCCCE-EEEECCCCC-------------CCEECCEEEECCHHHCCCCCCEEEEEEC
T ss_conf 95999922699997199999999728983-899787676-------------4255682752556775899728999808
No 53
>>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydrolase, cytoplasm, NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei 1710B} PDB: 3glq_A* (A:247-409)
Probab=35.96 E-value=27 Score=14.95 Aligned_cols=68 Identities=10% Similarity=0.111 Sum_probs=41.4
Q ss_pred CCCEEEEECCCCCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 89689994288854799-99999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 13 KGPVIILVDPQLGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
++-.|.++. -|+|| .+||.+++||+. ++.+++.. ..+..... ....+.+++++++.++.++.+.
T Consensus 30 ~g~~vgiiG---~G~IG~~iA~~l~~fg~~-V~~~~~~~----~~~~~~~~-------~~~~~~~~~~~l~~adiV~~~~ 94 (163)
T 3d64_A 30 AGKIAVVAG---YGDVGKGCAQSLRGLGAT-VWVTEIDP----ICALQAAM-------EGYRVVTMEYAADKADIFVTAT 94 (163)
T ss_dssp TTCEEEEEC---CSHHHHHHHHHHHTTTCE-EEEECSCH----HHHHHHHT-------TTCEECCHHHHTTTCSEEEECS
T ss_pred CCCEEEEEC---CCHHHHHHHHHHHHCCCE-EEEEECCC----CHHHHHHH-------CCEEEECHHHHHCCCCEEEECC
T ss_conf 698899984---178999999999868898-99992895----15888874-------7918622766754699999898
Q ss_pred CCCC
Q ss_conf 1122
Q gi|254780904|r 92 ARNR 95 (268)
Q Consensus 92 ~~~~ 95 (268)
....
T Consensus 95 p~~~ 98 (163)
T 3d64_A 95 GNYH 98 (163)
T ss_dssp SSSC
T ss_pred CCCC
T ss_conf 9988
No 54
>>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A (A:118-313)
Probab=33.68 E-value=29 Score=14.72 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=36.7
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 854799-9999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.-|||| .+++.+++||++ ++..+|..... +. ..... ....+.++++.++.++.+......
T Consensus 54 G~G~IG~~va~~l~afg~~-V~~~~~~~~~~-~~-~~~~~-------~~~~~~~l~~ll~~sDiV~~~~pl 114 (196)
T 2j6i_A 54 GAGRIGYRVLERLVPFNPK-ELLYYDYQALP-KD-AEEKV-------GARRVENIEELVAQADIVTVNAPL 114 (196)
T ss_dssp CCSHHHHHHHHHHGGGCCS-EEEEECSSCCC-HH-HHHHT-------TEEECSSHHHHHHTCSEEEECCCC
T ss_pred CCCCCCCEEEEEEECCCCC-CEECCCCCCCC-HH-HHHHC-------CCCCCCCHHHHHHHCCEEEECHHC
T ss_conf 4336542686320044433-01013543110-00-35532-------851156799998539999740000
No 55
>>3kbo_A Glyoxylate/hydroxypyruvate reductase A; NADP, cytoplasm, NAD, structural genomics; HET: NDP NDB EPE; 2.14A {Salmonella enterica subsp} (A:96-280)
Probab=30.54 E-value=33 Score=14.39 Aligned_cols=57 Identities=12% Similarity=0.054 Sum_probs=35.7
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 854799-9999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.-|||| .+||.+++||++ ++..+|.... .........+.++++++..++.+......
T Consensus 51 G~G~IG~~vA~~~~~fGm~-V~~~~~~~~~------------~~~~~~~~~~~~l~~~l~~aDiV~~~~pl 108 (185)
T 3kbo_A 51 GAGVLGAKVAESLQAWGFP-LRCWSRSRKS------------WPGVESYVGREELRAFLNQTRVLINLLPN 108 (185)
T ss_dssp SCSHHHHHHHHHHHTTTCC-EEEEESSCCC------------CTTEEEEESGGGHHHHHHTCSEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCE-EEECCCCCCC------------CCCCCCEEEECCHHHHHHCCCCCCCCCCC
T ss_conf 0003563210000136726-8730234432------------32222123311111111101121135875
No 56
>>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} (A:)
Probab=30.27 E-value=33 Score=14.36 Aligned_cols=85 Identities=15% Similarity=0.104 Sum_probs=46.7
Q ss_pred CCCCCCEEEEECCCCCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCC-CCCHHCCCCHHHHHHCCCCC
Q ss_conf 134896899942888547999-9999997199804980888899999999985310134-44200137789984125531
Q gi|254780904|r 10 NSAKGPVIILVDPQLGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCV-IDSVRVFSNLKEAIADLHFI 87 (268)
Q Consensus 10 ~~~~~~~vVLv~p~~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~-~~~~~~~~~~~~a~~~~~~~ 87 (268)
+..+.+-|..+ ..||||. ++-+.+.-++.+|+|++.........+.-....+... ........+..+++++++.+
T Consensus 10 ~~~~~~KI~Ii---GaG~vG~~~a~~l~~~~~~el~L~Di~~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~l~~aDiv 86 (328)
T 2hjr_A 10 TVIMRKKISII---GAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVV 86 (328)
T ss_dssp ---CCCEEEEE---CCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEE
T ss_pred CEECCCEEEEE---CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEHHHHCCCCCCCCEEEEECCCHHHHCCCCEE
T ss_conf 26035719999---969899999999967999879998599983571032263047548997399926845653466089
Q ss_pred EEEECCCCCC
Q ss_conf 0120112234
Q gi|254780904|r 88 YATTARNRNN 97 (268)
Q Consensus 88 ~~~~~~~~~~ 97 (268)
+.+.......
T Consensus 87 ii~~~~~~~~ 96 (328)
T 2hjr_A 87 IITAGVPRKP 96 (328)
T ss_dssp EECCSCCCCT
T ss_pred EEEECCCCCC
T ss_conf 9970588899
No 57
>>1jbo_A C-phycocyanin alpha chain; photosynthesis; HET: CYC; 1.45A {Synechococcus elongatus} (A:34-162)
Probab=29.69 E-value=34 Score=14.30 Aligned_cols=46 Identities=11% Similarity=0.169 Sum_probs=27.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7873410168899999999999621366544433333468888999999999999
Q gi|254780904|r 149 NPLFPSLNISQAVLLMVWECMENSIVSSEKNVKEQNTPATKGELLSFLDYLEISL 203 (268)
Q Consensus 149 ~~~~~SLNLS~AvaIvlYEl~r~~~~~~~~~~~~~~~~a~~~~l~~~~~~l~~~l 203 (268)
.+.|.|||++.+..|..-+.+|...... .....++...++|+...|
T Consensus 83 rE~y~~LgvP~~~~v~al~~mk~~~~~~---------~~~~~e~~~yfD~lI~~l 128 (129)
T 1jbo_A 83 SEINSTFDLSPSWYIEALKYIKANHGLT---------GQAAVEANAYIDYAINAL 128 (129)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHSCCC---------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHCCC---------HHHHHHHHHHHHHHHHHC
T ss_conf 9999982999899999999999871699---------999999888999999876
No 58
>>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} (A:1-193)
Probab=29.64 E-value=34 Score=14.29 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=33.8
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 854799-99999997199804980888899999999985310134442001377899841255310120
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
.-||+| ++||.++.+|+. +++.++.... .....+. ......+.+++...++.++...
T Consensus 37 G~G~mG~~iA~~l~~~G~~-v~~~d~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~d~v~~~~ 94 (193)
T 2uyy_A 37 GLGLMGSGIVSNLLKMGHT-VTVWNRTAEK---CDLFIQE-------GARLGRTPAEVVSTCDITFACV 94 (193)
T ss_dssp CCSHHHHHHHHHHHHTTCC-EEEECSSGGG---GHHHHHT-------TCEECSCHHHHHHHCSEEEECC
T ss_pred ECHHHHHHHHHHHHHCCCE-EEEEECCHHH---HHHHHHC-------CCEECCCHHHHHHCCCCCEEEC
T ss_conf 4279999999999978996-9999099999---9999985-------9968599999984367412214
No 59
>>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A* (A:287-422)
Probab=28.37 E-value=36 Score=14.16 Aligned_cols=108 Identities=7% Similarity=-0.041 Sum_probs=57.2
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHC-CCCEE-EECCCCCCCCCHHHHHHH-HHCCCCCCCHH---CCCCHHHHH
Q ss_conf 3213489689994288854799999999971-99804-980888899999999985-31013444200---137789984
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNF-NLTQL-RLVNPRDGWPSEKARSSS-ANADCVIDSVR---VFSNLKEAI 81 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~f-G~~~L-~lv~P~~~~~~~~a~~~a-~~a~~~~~~~~---~~~~~~~a~ 81 (268)
++-..+++.||+|--.+|.-+-+.+.+++.+ +-..+ .+.++..+....+..... ....+++-... .....++..
T Consensus 4 ~e~~~~g~~ii~D~ahNP~s~~a~l~~l~~~~~~~~~~~v~g~~~~k~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 83 (136)
T 1w78_A 4 FQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLHDKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLL 83 (136)
T ss_dssp SEEEETTTEEEEECCCSHHHHHHHHHHHHHSCSCSCEEEEECCBTTSCHHHHHHHHHTTCSEEEECCCCSSSBCCHHHHH
T ss_pred EEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHH
T ss_conf 26860387499985311678988876433222456530202656785799999998875699999899996779999999
Q ss_pred HCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 1255310120112234303412420356665531158816999945
Q gi|254780904|r 82 ADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGR 127 (268)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~ 127 (268)
.... .....................+.+.|+.|+
T Consensus 84 ~~~~------------~~~~~~~~~~a~~~~~~~~~~~d~ili~GS 117 (136)
T 1w78_A 84 EHLG------------NGKSFDSVAQAWDAAMADAKAEDTVLVCGS 117 (136)
T ss_dssp HHHS------------SCEECSSHHHHHHHHHHHCCTTCEEEEESS
T ss_pred HHHC------------CCCCCCCHHHHHHHHHHHCCCCCEEEEECH
T ss_conf 9860------------187569999999999985799897999546
No 60
>>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substrate-binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2h1s_A 2q50_A (A:108-297)
Probab=27.35 E-value=37 Score=14.04 Aligned_cols=59 Identities=20% Similarity=0.164 Sum_probs=36.7
Q ss_pred CCCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 88547999-999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 23 QLGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 23 ~~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
-.-||||. ++|.++.||+. ++.++|.... +.... .....+.+++++++.++.+......
T Consensus 54 iG~G~IG~~~a~~~~~fg~~-V~~~~~~~~~--~~~~~---------~~~~~~~~l~ell~~aDiv~~~~Pl 113 (190)
T 2gcg_A 54 IGLGRIGQAIARRLKPFGVQ-RFLYTGRQPR--PEEAA---------EFQAEFVSTPELAAQSDFIVVACSL 113 (190)
T ss_dssp ECCSHHHHHHHHHHGGGTCC-EEEEESSSCC--HHHHH---------TTTCEECCHHHHHHHCSEEEECCCC
T ss_pred EECCCCCCCCCEECCCCCCC-CCCCCCCCCC--CCCHH---------HHCCCCCHHHHHHCCCCEEEEECCC
T ss_conf 21122243200000011333-2222234543--21001---------1010000234441247689971467
No 61
>>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding domain, 37 amino acid insertional region; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis H37RV} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* (A:253-410)
Probab=26.62 E-value=38 Score=13.96 Aligned_cols=60 Identities=15% Similarity=0.069 Sum_probs=36.8
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 854799-999999971998049808888999999999853101344420013778998412553101201122
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARNR 95 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 95 (268)
.-|||| .+||.+++||++ ++.++|. +.....+.. ......+++++++.++.+..+.....
T Consensus 29 G~G~iG~~ia~~l~~~g~~-V~~~d~~-----~~~~~~~~~------~~~~~~~~~~~l~~~dvi~~~~p~~~ 89 (158)
T 3ce6_A 29 GYGDVGKGCAEAMKGQGAR-VSVTEID-----PINALQAMM------EGFDVVTVEEAIGDADIVVTATGNKD 89 (158)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEECSC-----HHHHHHHHH------TTCEECCHHHHGGGCSEEEECSSSSC
T ss_pred CCCCCCCHHHHHHCCCCCE-EEEECCC-----HHHHHHHHH------CCCEEECHHHHHCCCCEEEEECCCCC
T ss_conf 3565352177773548974-7871342-----566656574------39663017663232889999258866
No 62
>>2o3a_A UPF0106 protein AF_0751; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} (A:)
Probab=26.51 E-value=39 Score=13.95 Aligned_cols=114 Identities=18% Similarity=0.181 Sum_probs=64.9
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCCHHHHHH------HHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCCCCCEEEEC-
Q ss_conf 999999719980498088889999999998------5310134442001377899841255310120112234303412-
Q gi|254780904|r 31 VARAMWNFNLTQLRLVNPRDGWPSEKARSS------SANADCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLA- 103 (268)
Q Consensus 31 iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~------a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~- 103 (268)
++=++-+||.+.++|-. .++.+... .-|+.+.+.... +...++.. .......+
T Consensus 24 V~LtARAfGA~~i~l~~-----~D~~v~~sv~dV~~rwGG~F~ve~~~----w~~~ik~~-----------kG~VVHLTM 83 (178)
T 2o3a_A 24 VALTARAFGAKGIYFDT-----EDKSVFESVRDVVERWGGDFFIKAVS----WKKLLREF-----------DGLKVHLTM 83 (178)
T ss_dssp HHHHHHHTTCSEEEESS-----CCHHHHHHHHHHHHHHCSCCEEEECC----HHHHHHHC-----------CSEEEEEEE
T ss_pred HHHHHHHHCCCEEEECC-----CCHHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHC-----------CCEEEEEEC
T ss_conf 88999972687688757-----77268888999998518854898647----88975426-----------998999705
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 4203566655311588169999458884243100012322204767873410168899999999999
Q gi|254780904|r 104 PKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECME 170 (268)
Q Consensus 104 ~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r 170 (268)
--..............++.+|.|.|. .+.+.-+++|+-+.|-..|.-++ .|.||+|-.++-
T Consensus 84 YG~~i~dv~~~Ir~~~~ilvVVGaeK--VP~evYelADyNVaVgnQPHSEV----AALAiFLDrl~G 144 (178)
T 2o3a_A 84 YGIPLPQKLEEIKRADKVLVVVGAEK--VPPEVYELCDLNISIGTQPHSEV----AALAVFLDRVLG 144 (178)
T ss_dssp EEEEHHHHHHHHHTCSEEEEEEC------CTTHHHHSSEEEESSSSCCCHH----HHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHCCCCCEEEEECCCC--CCHHHHHHCCCCEEECCCCHHHH----HHHHHHHHHHHC
T ss_conf 88863777766314797799988885--99899853564155278880899----999999998607
No 63
>>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} (A:1-155)
Probab=24.51 E-value=42 Score=13.72 Aligned_cols=69 Identities=14% Similarity=0.033 Sum_probs=40.8
Q ss_pred CCHHHHH-HHHHHHCCCCE--------EEECCCCCCCCCHHHHHHH----HHCCCCCCCHHCCCCHHHHHHCCCCCEEEE
Q ss_conf 5479999-99999719980--------4980888899999999985----310134442001377899841255310120
Q gi|254780904|r 25 GENIGMV-ARAMWNFNLTQ--------LRLVNPRDGWPSEKARSSS----ANADCVIDSVRVFSNLKEAIADLHFIYATT 91 (268)
Q Consensus 25 p~NiGai-aRa~~~fG~~~--------L~lv~P~~~~~~~~a~~~a----~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~ 91 (268)
-|+||+- +=++..-|+.+ |+++... .+++...+ ..+........+.....+++++++.++.+.
T Consensus 12 ~G~VG~~~a~~l~~~~l~~~~~~~~~~L~~~d~~----~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~adiVIita 87 (155)
T 5mdh_A 12 AGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM----MGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVG 87 (155)
T ss_dssp TSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG----HHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEEECC
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC----CCCHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCEEEEEEC
T ss_conf 8678999999997204308998638999878897----650140258986088556786796576300046533999916
Q ss_pred CCCCCC
Q ss_conf 112234
Q gi|254780904|r 92 ARNRNN 97 (268)
Q Consensus 92 ~~~~~~ 97 (268)
+..+..
T Consensus 88 g~~~~~ 93 (155)
T 5mdh_A 88 SMPRRD 93 (155)
T ss_dssp SCCCCT
T ss_pred CCCCCC
T ss_conf 767899
No 64
>>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, serine metabolism; HET: NAD; 1.70A {Homo sapiens} (A:121-305)
Probab=23.52 E-value=44 Score=13.60 Aligned_cols=57 Identities=21% Similarity=0.061 Sum_probs=35.8
Q ss_pred CCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 8547999-999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 24 LGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 24 ~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.-||||. +++.+++||.. ++..++... +.... .....+.+++++++.++.+......
T Consensus 52 G~G~IG~~va~~l~~fG~~-v~~~~r~~~---~~~~~---------~~~~~~~~l~ell~~aDiv~~~~pl 109 (185)
T 2g76_A 52 GLGRIGREVATRMQSFGMK-TIGYDPIIS---PEVSA---------SFGVQQLPLEEIWPLCDFITVHTPL 109 (185)
T ss_dssp CCSHHHHHHHHHHHTTTCE-EEEECSSSC---HHHHH---------HTTCEECCHHHHGGGCSEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCE-EECCCCCCC---CCCCC---------CCCCCCCCHHHHHHHCCEEEECCCC
T ss_conf 9851012000012468986-876664544---23312---------2453324687765109999991788
No 65
>>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} (A:298-428)
Probab=23.42 E-value=44 Score=13.59 Aligned_cols=44 Identities=11% Similarity=0.188 Sum_probs=35.4
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECC-CCCC
Q ss_conf 3213489689994288854799999999971998049808-8889
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVN-PRDG 51 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~-P~~~ 51 (268)
++--.++|.|++|.-.+|..+-+++.+...+.-..+++|- +..+
T Consensus 4 ~e~i~~~~~ii~D~AHNp~~i~~~~~~l~~~~~~~~~~v~~~~~d 48 (131)
T 1jbw_A 4 LEKISDTPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGILAD 48 (131)
T ss_dssp SEEEETTTTEEEECCCSHHHHHHHHHHHHHHCSSCCEEEEECSSS
T ss_pred EEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 467426876999778898999999999998617882389974179
No 66
>>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, structural genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 1li4_A* 1a7a_A* (A:190-346)
Probab=22.77 E-value=45 Score=13.50 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=36.3
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 854799-999999971998049808888999999999853101344420013778998412553101201122
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARNR 95 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 95 (268)
.-|||| .+||.+.+||+. ++.++|.. ......... ......++++...++.+..+.....
T Consensus 29 G~G~iG~~vA~~l~~~g~~-V~~~d~~~----~~~~~~~~~-------~~~~~~~~~~~~~ad~v~l~~~t~~ 89 (157)
T 3h9u_A 29 GYGDVGKGCAAALRGFGAR-VVVTEVDP----INALQAAME-------GYQVLLVEDVVEEAHIFVTTTGNDD 89 (157)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEECSCH----HHHHHHHHT-------TCEECCHHHHTTTCSEEEECSSCSC
T ss_pred CCCCCCHHHHHHHHCCCCE-EEEEECCH----HHHHHHHHC-------CCCCCCHHHHHHHCCEEEEECCCCC
T ss_conf 0366344889987238988-99997745----768999867-------9924558998855899999557877
No 67
>>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} (A:1-156)
Probab=22.70 E-value=42 Score=13.71 Aligned_cols=69 Identities=14% Similarity=0.036 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHCC---------CCEEEECCCCCCCCCHHHHHHH----HHCCCCCCCHHCCCCHHHHHHCCCCCEEEEC
Q ss_conf 47999999999719---------9804980888899999999985----3101344420013778998412553101201
Q gi|254780904|r 26 ENIGMVARAMWNFN---------LTQLRLVNPRDGWPSEKARSSS----ANADCVIDSVRVFSNLKEAIADLHFIYATTA 92 (268)
Q Consensus 26 ~NiGaiaRa~~~fG---------~~~L~lv~P~~~~~~~~a~~~a----~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 92 (268)
|+||+-.=.....+ ..+|++++... +++...+ ..+........+.....+++++++.++.+.+
T Consensus 14 G~VG~~~a~~l~~~~l~~~~~~~~~~L~l~D~~~----~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~aDivIitag 89 (156)
T 1y7t_A 14 GQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAM----KALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVGA 89 (156)
T ss_dssp SHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGH----HHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC----CCCHHHHHCHHHCCCCCCCCCCCCCCEECCCCCCCEEEEECC
T ss_conf 3899999999984054179973699998574751----344102428865787544650024420012356414776136
Q ss_pred CCCCCC
Q ss_conf 122343
Q gi|254780904|r 93 RNRNNF 98 (268)
Q Consensus 93 ~~~~~~ 98 (268)
..+...
T Consensus 90 ~~~~~~ 95 (156)
T 1y7t_A 90 APRKAG 95 (156)
T ss_dssp CCCCTT
T ss_pred CCCCCC
T ss_conf 667899
No 68
>>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} (A:92-281)
Probab=22.54 E-value=46 Score=13.48 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=34.9
Q ss_pred CCCHHH-HHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 854799-9999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 24 LGENIG-MVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 24 ~p~NiG-aiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.-|||| .++|.+.+||+. ++..+|..... ..........++++++..++.+......
T Consensus 53 G~G~IG~~va~~l~~fG~~-V~~~~~~~~~~------------~~~~~~~~~~~l~~ll~~aD~v~~~~p~ 110 (190)
T 3evt_A 53 GTGQIGQSLAAKASALGMH-VIGVNTTGHPA------------DHFHETVAFTATADALATANFIVNALPL 110 (190)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEEESSCCCC------------TTCSEEEEGGGCHHHHHHCSEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCEE-EECCCCCCCCC------------CCCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 4322344220010254205-73147875433------------2211113443200112232211123455
No 69
>>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase family protein; structural genomics, protein structure initiative; 1.80A {Aeromonas salmonicida subsp} (A:98-281)
Probab=21.83 E-value=47 Score=13.39 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=36.9
Q ss_pred CCCHHHH-HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 8547999-999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 24 LGENIGM-VARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 24 ~p~NiGa-iaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
.-||||. +||.+++||+. ++..+|..... ........+.+++++++.++.+......
T Consensus 50 G~G~IG~~vA~~~~afg~~-V~~~~~~~~~~------------~~~~~~~~~~~~~ell~~sd~i~~~~pl 107 (184)
T 3hg7_A 50 GTGSIGQHIAHTGKHFGMK-VLGVSRSGRER------------AGFDQVYQLPALNKMLAQADVIVSVLPA 107 (184)
T ss_dssp CCSHHHHHHHHHHHHTTCE-EEEECSSCCCC------------TTCSEEECGGGHHHHHHTCSEEEECCCC
T ss_pred HHCCCCCCEECCCCCCCCC-CCCCCCCCCCC------------CHHCCCCEECCHHCCCCCCCCCCCCCCC
T ss_conf 0013443100011233222-22333433321------------0100222001100022245644122333
No 70
>>2vml_B Phycocyanin beta chain; photosynthesis, light-harvesting, electron transport, transport, chromophore, bIle pigment, phycobilisome; HET: CYC; 2.40A {Gloeobacter violaceus} PDB: 2vjr_B* (B:36-172)
Probab=21.57 E-value=48 Score=13.35 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=32.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6787341016889999999999962136---6544433333468888999999999999
Q gi|254780904|r 148 VNPLFPSLNISQAVLLMVWECMENSIVS---SEKNVKEQNTPATKGELLSFLDYLEISL 203 (268)
Q Consensus 148 t~~~~~SLNLS~AvaIvlYEl~r~~~~~---~~~~~~~~~~~a~~~~l~~~~~~l~~~l 203 (268)
..+.|.||||+.+..|..-+.+|..... .+.........+...|+...++|+...|
T Consensus 78 lrE~Y~sLgvP~~~~v~al~~lk~~~~~~~~~~~~~~~g~c~~~~~e~~~yfD~lI~~L 136 (137)
T 2vml_B 78 LKETYVALGTPTRSVARAVQLMKETAIGYVNSPSGVTRGDCSALVNEAATYFDKAAASI 136 (137)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHSCSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 89999987798799999999999999998346234662216999999985899999872
No 71
>>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenase; HET: NAD; 2.20A {Weissella confusa} (A:)
Probab=21.45 E-value=48 Score=13.34 Aligned_cols=72 Identities=10% Similarity=0.034 Sum_probs=44.4
Q ss_pred CCCHHHHHHHH-HHHCC-CCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 85479999999-99719-98049808888999999999853101344420013778998412553101201122
Q gi|254780904|r 24 LGENIGMVARA-MWNFN-LTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARNR 95 (268)
Q Consensus 24 ~p~NiGaiaRa-~~~fG-~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 95 (268)
..|++|...-- +...+ +++|+|++.........+.-....+........+..+..+++.+.++++.+....+
T Consensus 8 GaG~vg~~l~~~l~~~~~~~ei~L~D~~~~~l~~~~~d~~~~~~~~~~~~~i~~~~~~al~~ad~Vi~~~~~~~ 81 (309)
T 1hyh_A 8 GLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNIK 81 (309)
T ss_dssp CCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCGG
T ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEECCCHHHHCCCCEEEEECCCCC
T ss_conf 97989999999998369988399975899744534375662563358873680598789579988999446556
No 72
>>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} (A:)
Probab=21.31 E-value=49 Score=13.32 Aligned_cols=78 Identities=12% Similarity=0.025 Sum_probs=46.5
Q ss_pred CCCEEEEECCCCCCHHHHHH--HHHHHCCCCEEEECCCCCCCCCHHHHHHHH----HCCCCCCCHHCCCCHHHHHHCCCC
Q ss_conf 89689994288854799999--999971998049808888999999999853----101344420013778998412553
Q gi|254780904|r 13 KGPVIILVDPQLGENIGMVA--RAMWNFNLTQLRLVNPRDGWPSEKARSSSA----NADCVIDSVRVFSNLKEAIADLHF 86 (268)
Q Consensus 13 ~~~~vVLv~p~~p~NiGaia--Ra~~~fG~~~L~lv~P~~~~~~~~a~~~a~----~a~~~~~~~~~~~~~~~a~~~~~~ 86 (268)
++.-|... ..|+||+.. +.+..--+++|+|++... +++...++ .+........+..+..+++.+++.
T Consensus 6 ~~~KI~ii---GaG~vg~~la~~l~~~~l~~el~L~D~~~----~~~~~~~~dl~~~~~~~~~~~~~~~~~~~al~~aDi 78 (319)
T 1lld_A 6 KPTKLAVI---GAGAVGSTLAFAAAQRGIAREIVLEDIAK----ERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADM 78 (319)
T ss_dssp -CCEEEEE---CCSHHHHHHHHHHHHTTCCSEEEEECSSH----HHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSE
T ss_pred CCCEEEEE---CCCHHHHHHHHHHHHCCCCCEEEEEECCC----CCCHHHHHHHHCCCCCCCCCEEEECCCHHHHCCCCE
T ss_conf 99759999---96989999999998179998799992899----813889999876676689976981797799578879
Q ss_pred CEEEECCCCCC
Q ss_conf 10120112234
Q gi|254780904|r 87 IYATTARNRNN 97 (268)
Q Consensus 87 ~~~~~~~~~~~ 97 (268)
++.+....+..
T Consensus 79 VIi~~~~~~~~ 89 (319)
T 1lld_A 79 VVITAGPRQKP 89 (319)
T ss_dssp EEECCCCCCCT
T ss_pred EEEECCCCCCC
T ss_conf 99946888999
No 73
>>1jbo_B C-phycocyanin beta chain; photosynthesis; HET: CYC; 1.45A {Synechococcus elongatus} (B:34-172)
Probab=20.75 E-value=50 Score=13.25 Aligned_cols=55 Identities=9% Similarity=0.250 Sum_probs=33.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 787341016889999999999962136---6544433333468888999999999999
Q gi|254780904|r 149 NPLFPSLNISQAVLLMVWECMENSIVS---SEKNVKEQNTPATKGELLSFLDYLEISL 203 (268)
Q Consensus 149 ~~~~~SLNLS~AvaIvlYEl~r~~~~~---~~~~~~~~~~~a~~~~l~~~~~~l~~~l 203 (268)
.+.|.|||+..+..|.+-+.+|..... .+.............++...++|+...|
T Consensus 81 rE~Y~sL~vP~~~~v~al~~mk~~~~~~~~~~~~~~~~~~~~~~~e~~~yfD~lI~~L 138 (139)
T 1jbo_B 81 RETYQALGTPGSSVAVAIQKMKDAAIAIANDPNGITPGDCSALMSEIAGYFDRAAAAV 138 (139)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCCTTSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999996898589999999999999987068445772106899999995899999871
Done!