HHsearch results for GI: 254780904 and protein with PDBid: 3kty_A
>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.30A {Bordetella pertussis}
Probab=100.00 E-value=7.4e-37 Score=250.35 Aligned_cols=165 Identities=29% Similarity=0.359 Sum_probs=140.5
Q ss_pred HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC--CHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCC
Q ss_conf 3213489689994288854799999999971998049808888999--99999985310134442001377899841255
Q gi|254780904|r 8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWP--SEKARSSSANADCVIDSVRVFSNLKEAIADLH 85 (268)
Q Consensus 8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~--~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~ 85 (268)
|....+++.|||++||+|+|+|+|+|+|++||+++++|++|++++. ++++.+.+.|+.+.......+..++.+.....
T Consensus 4 ~~~~~~~i~vVL~~~~~P~NlGaIiRsa~afG~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (173)
T 3kty_A 4 MTQAFSRVRFIMTQPSHPGNVGSAARAIKTMGFGELVLVAPRFPDMTAQPEAVALASGALDVLERAAVHDTLEEALAPVT 83 (173)
T ss_dssp HHHHHTTEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHHTTCHHHHHTCEEESCHHHHHTTCS
T ss_pred HHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEEECCHHHHHHHHCC
T ss_conf 12413865999927989874999999999829988999899777778878898733876045444210332999985202
Q ss_pred CCEEEECCCCCCCEEEECCCC--HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHH
Q ss_conf 310120112234303412420--356665531158816999945888424310001232220476787341016889999
Q gi|254780904|r 86 FIYATTARNRNNFKSVLAPKE--AAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLL 163 (268)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaI 163 (268)
....+....+........... ............++++||||+|++||++++++.||++++|||.+.++|||||+|++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~~~~~d~~v~IPm~~~~~SLNvs~AaaI 163 (173)
T 3kty_A 84 LAFALTTRVRDLGPPPCDIREAAGLARRHLDDTEAGVVAIVLGTERAGLTNAQIELCHRICHIPANPQYSSLNVAQALQL 163 (173)
T ss_dssp EEEEEECC-----CCCEEHHHHHHHHHHHHHHSSSCCEEEEECCCC-CCCHHHHHTSSEEEECCCCSTTCCCCHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCEEHHHHHHH
T ss_conf 22100000122334323223433222333332146762899777567889899974797999418989982678999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999962
Q gi|254780904|r 164 MVWECMENS 172 (268)
Q Consensus 164 vlYEl~r~~ 172 (268)
+||||+|+.
T Consensus 164 ~lyElrra~ 172 (173)
T 3kty_A 164 AAWELRYAL 172 (173)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999975