HHsearch results for GI: 254780904 and protein with PDBid: 3kty_A

>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.30A {Bordetella pertussis}
Probab=100.00  E-value=7.4e-37  Score=250.35  Aligned_cols=165  Identities=29%  Similarity=0.359  Sum_probs=140.5

Q ss_pred             HHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC--CHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCC
Q ss_conf             3213489689994288854799999999971998049808888999--99999985310134442001377899841255
Q gi|254780904|r    8 LQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWP--SEKARSSSANADCVIDSVRVFSNLKEAIADLH   85 (268)
Q Consensus         8 l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~--~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~   85 (268)
                      |....+++.|||++||+|+|+|+|+|+|++||+++++|++|++++.  ++++.+.+.|+.+.......+..++.+.....
T Consensus         4 ~~~~~~~i~vVL~~~~~P~NlGaIiRsa~afG~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (173)
T 3kty_A            4 MTQAFSRVRFIMTQPSHPGNVGSAARAIKTMGFGELVLVAPRFPDMTAQPEAVALASGALDVLERAAVHDTLEEALAPVT   83 (173)
T ss_dssp             HHHHHTTEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHHTTCHHHHHTCEEESCHHHHHTTCS
T ss_pred             HHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEEECCHHHHHHHHCC
T ss_conf             12413865999927989874999999999829988999899777778878898733876045444210332999985202


Q ss_pred             CCEEEECCCCCCCEEEECCCC--HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHH
Q ss_conf             310120112234303412420--356665531158816999945888424310001232220476787341016889999
Q gi|254780904|r   86 FIYATTARNRNNFKSVLAPKE--AAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLL  163 (268)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaI  163 (268)
                      ....+....+...........  ............++++||||+|++||++++++.||++++|||.+.++|||||+|++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~~~~~d~~v~IPm~~~~~SLNvs~AaaI  163 (173)
T 3kty_A           84 LAFALTTRVRDLGPPPCDIREAAGLARRHLDDTEAGVVAIVLGTERAGLTNAQIELCHRICHIPANPQYSSLNVAQALQL  163 (173)
T ss_dssp             EEEEEECC-----CCCEEHHHHHHHHHHHHHHSSSCCEEEEECCCC-CCCHHHHHTSSEEEECCCCSTTCCCCHHHHHHH
T ss_pred             CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCEEHHHHHHH
T ss_conf             22100000122334323223433222333332146762899777567889899974797999418989982678999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999962
Q gi|254780904|r  164 MVWECMENS  172 (268)
Q Consensus       164 vlYEl~r~~  172 (268)
                      +||||+|+.
T Consensus       164 ~lyElrra~  172 (173)
T 3kty_A          164 AAWELRYAL  172 (173)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
T ss_conf             999999975