HHSEARCH alignment of GI: 254780904 and SCOP domain: d1pvva2

Alignment

Probab=91.74  E-value=0.37  Score=24.23  Aligned_cols=78  Identities=21%  Similarity=0.231  Sum_probs=60.4

Q ss_pred             CCCCEEEEECCCCCCHH-HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCHHCCCCHHHHHHCCCCCEE
Q ss_conf             48968999428885479-99999999719980498088889999999998531-01344420013778998412553101
Q gi|254780904|r   12 AKGPVIILVDPQLGENI-GMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSAN-ADCVIDSVRVFSNLKEAIADLHFIYA   89 (268)
Q Consensus        12 ~~~~~vVLv~p~~p~Ni-GaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~-a~~~~~~~~~~~~~~~a~~~~~~~~~   89 (268)
                      -++..|++|+.  -.|+ -|.+.++.-||+ ++.++.|....+.++....+.. +........++.+..+++.+++.+..
T Consensus         2 l~gl~Ia~VGD--~~nv~~Sli~~l~~~g~-~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~   78 (163)
T d1pvva2           2 IKGVKVVYVGD--GNNVAHSLMIAGTKLGA-DVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYT   78 (163)
T ss_dssp             CTTCEEEEESC--CCHHHHHHHHHHHHTTC-EEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECC--CCHHHHHHHHHHHHCCC-EEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCEEEE
T ss_conf             58999999889--71899999999998599-4897365002787689999987510355508996598998614448854


Q ss_pred             EEC
Q ss_conf             201
Q gi|254780904|r   90 TTA   92 (268)
Q Consensus        90 ~~~   92 (268)
                      +.-
T Consensus        79 ~~~   81 (163)
T d1pvva2          79 DVW   81 (163)
T ss_dssp             CCC
T ss_pred             CCE
T ss_conf             112

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]