BLAST/PSIBLAST alignment of GI: 254780904 and GI: 116252374 at iteration 1
>gi|116252374|ref|YP_768212.1| rRNA methylase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 276
>gi|115257022|emb|CAK08116.1| putative rRNA methylase family protein [Rhizobium leguminosarum bv. viciae 3841] Length = 276
Score = 279 bits (713), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/246 (53%), Positives = 182/246 (73%), Gaps = 2/246 (0%)
Query: 12 AKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSV 71
A+GP IILV+PQ+GENIGMVARAM NF L +LRLVNPRDGWP+EKA ++++ AD VI+
Sbjct: 12 AEGPAIILVEPQMGENIGMVARAMANFGLAELRLVNPRDGWPNEKALATASKADHVIEET 71
Query: 72 RVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWG 131
+V+ L++A+ADL+F+YATTAR R+ +K V +P AA L R +G+ GI+FGRERWG
Sbjct: 72 KVYDTLEQAVADLNFVYATTARERDGYKPVRSPVIAAETLRARFRAGEGTGILFGRERWG 131
Query: 132 LTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSI--VSSEKNVKEQNTPATK 189
LTNEE+AL++ I++FPVNP F SLNI+QAVLLM +E M++ + + + TP+TK
Sbjct: 132 LTNEEVALADEIVTFPVNPAFASLNIAQAVLLMSYEWMKSGMEDLGAVPFQAMGQTPSTK 191
Query: 190 GELLSFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKF 249
+L D LE +L+ RGYF P KK KM+D+L ++ R +E+ +LRG++S+LD+F
Sbjct: 192 EQLFGLFDQLEEALDARGYFHPAGKKPKMVDNLRAVLSRRAFTEQEISVLRGVISSLDRF 251
Query: 250 SRQSSR 255
SR+S R
Sbjct: 252 SRKSPR 257