RPSBLAST alignment of GI: 254780904 and protein with PDBid: 2ha8

>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens} Length = 184

 Score = 56.5 bits (135), Expect = 7e-09
 Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 9/165 (5%)

Query: 5   APQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANA 64
           A +L  S    +++        N+G + R    F  + L + + +     +    S +  
Sbjct: 17  AARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSAE 76

Query: 65  DCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGII 124
             +         L + +        T        K          +   +    +   ++
Sbjct: 77  QWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAK---------SLDLTQYCFPEKSLLL 127

Query: 125 FGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECM 169
            G ER G+    I   +  +  P   +  SLN+  +  L++WE  
Sbjct: 128 LGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYT 172