RPSBLAST alignment of GI: 254780904 and protein with PDBid: 3ic6

>3ic6_A Putative methylase family protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.59A {Neisseria gonorrhoeae fa 1090} Length = 223
 Score =  126 bits (317), Expect = 5e-30
 Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 20/219 (9%)

Query: 1   MTPYAPQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPS------ 54
           MT   P L +      IIL       NIG  ARAM    L +L +V P            
Sbjct: 4   MTALKPALPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHRLTIVTPNLMATPMTENPP 63

Query: 55  -------------EKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSV 101
                        E++   ++ A  V+ +  + + L EA+AD     A T+R R     +
Sbjct: 64  VFNPDDVQSFALPEESFILASGAADVLHNAEIVATLDEALADTTIACALTSRRREITAPL 123

Query: 102 LAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAV 161
             P++    L +    G+ V ++FG E +GL+ EE+   N +++   NP + SLN++QAV
Sbjct: 124 QTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACNRLMTINGNPDYFSLNLAQAV 183

Query: 162 LLMVWECMENSIVSSEKNVKEQNTPATKGELLSFLDYLE 200
            ++ +E   +   S   ++++++  AT  ++   L ++E
Sbjct: 184 QVVCYEIF-SQTDSPMTHLQQEDHAATHEQIKGMLAHME 221