RPSBLAST alignment of GI: 254780904 and protein with PDBid: 3ilk
>3ilk_A Uncharacterized tRNA/RRNA methyltransferase HI0380; APC63004, methylase family protein, haemophilus influenzae RD KW20; 2.01A {Haemophilus influenzae} Length = 244
Score = 117 bits (293), Expect = 3e-27
Identities = 70/244 (28%), Positives = 124/244 (50%), Gaps = 12/244 (4%)
Query: 17 IILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSN 76
I+L++ NIG ARAM LTQL LV+P+ E++ + SA A+ ++ + RV +
Sbjct: 10 IVLIETSHSGNIGSAARAMKTMGLTQLCLVSPKS--VDEQSYALSAGAENIVKNARVVDS 67
Query: 77 LKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEE 136
EA+ D + T+AR R+ +++ P + + + I+FGRER GLTNEE
Sbjct: 68 FDEAVDDCSLVIGTSARLRHLQNTLIEP---RECAEKVVAYKGKIAIVFGRERIGLTNEE 124
Query: 137 IALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSIVSSEK---NVKEQNTPATKGELL 193
+ + ++ P NP + SLN++ AV L+ +E +V + K + T +L
Sbjct: 125 LLKCHYHLNIPANPDYSSLNLAMAVQLVSYELRMAFLVQNNKKNSLSLIEKNYPTTDQLA 184
Query: 194 SFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQS 253
F DY E + G+ + + ++ L ++ R +L + E+ +L G++S ++K +
Sbjct: 185 YFFDYTERIYQSLGFI----QNQGVMRKLKRLYYRAKLEKNELNILNGMLSAVEKRIDLT 240
Query: 254 SRRN 257
N
Sbjct: 241 KEDN 244