RPSBLAST alignment of GI: 254780904 and SCOP domain: d1ipaa1

Alignment

 Score = 51.9 bits (123), Expect = 6e-08
 Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 13/163 (7%)

Query: 7   QLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADC 66
           + + S    +++ V  +   N+G V R+        + +    D +  +  R+   +   
Sbjct: 4   EYRPSPDALILVAVGLEKPGNLGAVLRSADAAGAEAVLVAGGVDLYSPQVIRN---STGV 60

Query: 67  VIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFG 126
           V     + ++  E +  +            + +++                   V I  G
Sbjct: 61  VFSLRTLAASESEVLDWIKQHNLPLVATTPHAEAL----------YWEANLRPPVAIAVG 110

Query: 127 RERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECM 169
            E  GL    +  +   +  P+     SLN+S +  L+++E +
Sbjct: 111 PEHEGLRAAWLEAAQTQVRIPMQGQADSLNVSVSAALLLYEAL 153

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: SpoU-like RNA 2'-O ribose methyltransferase
domain: RrmA (RrmH), C-terminal domain
species: Thermus thermophilus [TaxId: 274]