HHsearch alignment for GI: 254780905 and conserved domain: COG0796
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=540.89 Aligned_cols=254 Identities=32% Similarity=0.502 Sum_probs=237.0
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
Q ss_conf 34887079877910589999999968999899994157898989898999999999999986216984899717620263
Q gi|254780905|r 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL 90 (271)
Q Consensus 11 ~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~ 90 (271)
T Consensus 3 ~~~~~IgvFDSGVGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~-ik~lVIACNTASa~ 81 (269)
T COG0796 3 EPQPPIGVFDSGVGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG-IKALVIACNTASAV 81 (269)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHHH
T ss_conf 66681899978987089999999978998689981477899998999999999999999999729-98899966517899
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 38999862577765445479999998407883299850677317016899851278857977056422578776642677
Q gi|254780905|r 91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 (271)
Q Consensus 91 ~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~ 170 (271)
T Consensus 82 al~~LR~~~-~iPVvGviPaik~A~~~t~~~~IgViaT~~Tvks~~y~~~i~~~~~~~~V~~la~p~lV~lvE~g~~~~~ 160 (269)
T COG0796 82 ALEDLREKF-DIPVVGVIPAIKPAVALTRNGRIGVIATPATVKSNAYRDLIARFAPDCEVESLACPELVPLVEEGIRGGP 160 (269)
T ss_pred HHHHHHHHC-CCCEEEECCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCH
T ss_conf 999999867-9998995315499997313875899955112401899999998589987997038401888845642578
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCC--CE
Q ss_conf 6979999999998465410588789980563588999999864899789828589999999998642733457788--77
Q gi|254780905|r 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DH 248 (271)
Q Consensus 171 ~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~~--~~ 248 (271)
T Consensus 161 ----~~~~~l~~~l~~~~~~~~DtlVLGCTHyPll~~~i~~~~~~~v~lids~~~~a~~~~~~L~~~~~~~~~~~~~~~~ 236 (269)
T COG0796 161 ----VALEVLKEYLPPLQEAGPDTLVLGCTHYPLLKPEIQQVLGEHVALIDSGAETARRLARLLSPEGLLAKGADGGPDH 236 (269)
T ss_pred ----HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCHHHHCCCCCCCCCCE
T ss_conf ----8999999984004306998899917480878999999827895687789999999999707232035555788655
Q ss_pred EEEECCCHHHHHHHHHHHCCCC
Q ss_conf 9996699799999999856888
Q gi|254780905|r 249 ALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 249 ~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
T Consensus 237 ~f~~tg~~~~~~~~~~~~l~~~ 258 (269)
T COG0796 237 RFFTTGDPDEFEQLLKRWLGLG 258 (269)
T ss_pred EEEECCCCHHHHHHHHHHHCCC
T ss_conf 9997699589999999985457