HHsearch alignment of GI: 254780905 and MMDB domain: 1jfl_A_1-102_213-228
>1jfl_A (A:1-102,A:213-228) Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomerase; 1.90A {Pyrococcus horikoshii OT3}
Probab=98.30 E-value=2.1e-06 Score=62.48 Aligned_cols=90 Identities=16% Similarity=0.375 Sum_probs=55.4
Q ss_pred CCEEEEECCCCH---HHHHHHHHHHCCCC------CEEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 870798779105---89999999968999------8999941578989------89898999999999999986216984
Q gi|254780905|r 14 NSILIFDSGIGG---LIVLQKMRFLMPEY------HFIYVADDVGFPY------GNWEDHALKKRLMFLFSDILDKYQPV 78 (271)
Q Consensus 14 ~~IgifDSGiGG---Ltv~~~l~~~lP~~------~~iY~~D~~~~PY------G~ks~~~I~~~~~~~~~~ll~k~~~~ 78 (271)
+.|||. .|+|- ...++.|.+..+.. +++-+- ...+|+ |++ ++......+.+.+| ++.|++
T Consensus 2 K~IGII-GGmGp~AT~~yy~~I~~~~~a~~d~~~~~~ii~s-~~~~~~r~~~~~~~~--~~~~~~L~~~~~~L-~~aGad 76 (118)
T 1jfl_A 2 KTIGIL-GGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFN-NPQIPDRTAYILGKG--EDPRPQLIWTAKRL-EECGAD 76 (118)
T ss_dssp CCEEEE-ECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEE-CTTSCCHHHHHTTSS--CCCHHHHHHHHHHH-HHHTCS
T ss_pred CEEEEE-ECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-CCCHHHHHHHHHCCH--HHHHHHHHHHHHHH-HHCCCC
T ss_conf 889996-2779799999999999999875488788288885-797778888861245--77999999999999-976999
Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 89971762026338999862577765445479
Q gi|254780905|r 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110 (271)
Q Consensus 79 ~IVIACNTasa~~~~~l~~~~~~ipiigii~~ 110 (271)
+++|+|||+| .+++.++++. ++|+++-.+-
T Consensus 77 ~ivi~cNTaH-~~~d~i~~~~-~iPllh~~~~ 106 (118)
T 1jfl_A 77 FIIMPCNTAH-AFVEDIRKAI-KIPIISPMDV 106 (118)
T ss_dssp EEECSCTGGG-GGHHHHHHHC-SSCBCCHHHH
T ss_pred EEEEECHHHH-HHHHHHHHHC-CCCCCCCHHH
T ss_conf 9999552799-9999999971-8996135999