HHsearch results for GI: 254780905 and protein with PDBid: 2jfn_A
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=100.00 E-value=0 Score=516.21 Aligned_cols=252 Identities=32% Similarity=0.599 Sum_probs=231.3
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
Q ss_conf 70798779105899999999689998999941578989898989999999999999862169848997176202633899
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~ 94 (271)
||||||||+|||||+++|++++|+++|+|||||+|+|||+||+++|++++.+++++|++++++++|||||||||+.+++.
T Consensus 23 ~IgvfDSGvGGLtVl~~l~~~lP~~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~ll~k~g~~~IViACNTasa~a~~~ 102 (285)
T 2jfn_A 23 TVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA 102 (285)
T ss_dssp EEEEEESSSTHHHHHHHHHHHSTTSEEEEEECTTTCCTTTSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf 58998388358999999998789999899954787998999999999999999999986067768996064778998999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHH
Q ss_conf 98625777654454799999984078832998506773170168998512788579770564225787766426776979
Q gi|254780905|r 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 (271)
Q Consensus 95 l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~ 174 (271)
||+++ ++||+||+|++++++..+++++||||||++|++|++|++.+++++++++|..++|+.||++||++..+.....+
T Consensus 103 L~~~~-~~piigiip~~~~a~~~~~~~~IgVLaT~~Ti~s~~y~~~i~~~~~~~~V~~~~~~~lv~lIE~g~~~~~~~~~ 181 (285)
T 2jfn_A 103 LREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLD 181 (285)
T ss_dssp HHHHC-SSCEECCCCCHHHHHHHCSSSEEEEEECTTGGGCHHHHHHHHHSCTTSEEEEEECHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHC-CCCEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHHH
T ss_conf 99873-99812344899999872576669998106466627999999972899689972576421344430458878999
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
Q ss_conf 99999999846541058878998056358899999986489978982858999999999864273345778877999669
Q gi|254780905|r 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 (271)
Q Consensus 175 ~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~~~~~f~~T~ 254 (271)
.++.+++.++. ..+++|++|||||||||+++.|++++|+++++|||++++|+++.++|.++++.+....++..||+++
T Consensus 182 ~~~~~l~~~l~--~~~~~D~iILGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~~~~~L~~~~~~~~~~~~~~~f~~~~ 259 (285)
T 2jfn_A 182 ALKRILRPWLR--MKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAM 259 (285)
T ss_dssp HHHHHTHHHHT--CSSCCSEEEECSTTGGGGHHHHHHHSCTTCEEECSHHHHHHHHHHHHHHTCCSCEECSCCEEEESSC
T ss_pred HHHHHHHHHHH--CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
T ss_conf 99999999985--1568876998273688899999998199989987889999999999974465445899975999858
Q ss_pred CHH--HHHHHHHHHCCCC
Q ss_conf 979--9999999856888
Q gi|254780905|r 255 KPD--IAMRRLMQGFGLK 270 (271)
Q Consensus 255 ~~~--~~~~~~~~~~G~~ 270 (271)
+++ .|.+.+ ++||++
T Consensus 260 t~~~~~~~~~~-~~~~~~ 276 (285)
T 2jfn_A 260 TPGAEQLLPVL-QRYGFE 276 (285)
T ss_dssp CHHHHTTHHHH-HHTTCC
T ss_pred CCHHHHHHHHH-HHHCCC
T ss_conf 96099999999-983997