HHsearch results for GI: 254780905 and protein with PDBid: 2jfq_A
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=0 Score=530.71 Aligned_cols=260 Identities=22% Similarity=0.340 Sum_probs=240.2
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 33446348870798779105899999999689998999941578989898989999999999999862169848997176
Q gi|254780905|r 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85 (271)
Q Consensus 6 ~~~~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACN 85 (271)
.|-..+|++||||||||+|||||+++|++++|+++|+||||++|+|||+||++||++++.+++++|. +.+|++||||||
T Consensus 15 ~~~~~~mn~PIgvfDSGvGGLtvl~~l~~~lP~~~~iY~~D~~~~PYG~ks~eei~~~~~~~~~~L~-~~g~~~iVIACN 93 (286)
T 2jfq_A 15 VPRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLM-EFDIKMLVIACN 93 (286)
T ss_dssp ------CCSCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHT-TSCCSEEEECCH
T ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEECCC
T ss_conf 6686568998899978977799999999978999989994588898888999999999999999998-669999998167
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
Q ss_conf 20263389998625777654454-79999998407883299850677317016899851278857977056422578776
Q gi|254780905|r 86 TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 (271)
Q Consensus 86 Tasa~~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~ 164 (271)
|||+.+++.+|+++ ++|++||+ |+++.|+..+++++||||||++|++|++|+++++++++++.+..++|+.||++||+
T Consensus 94 TAs~~al~~l~~~~-~ipiigii~p~~k~a~~~~~~~~IgvlaT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~Lv~lIE~ 172 (286)
T 2jfq_A 94 TATAVALEYLQKTL-SISVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ 172 (286)
T ss_dssp HHHHHHHHHHHHHC-SSEEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHHT
T ss_pred CHHHHHHHHHHHHC-CCCEEEECHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
T ss_conf 58999999999866-99889613799999987147856999942145536599999974089865898245138899996
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 64267769799999999984654105887899805635889999998648997898285899999999986427334-57
Q gi|254780905|r 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TR 243 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~-~~ 243 (271)
+... .....+..++.++.++.++++|++|||||||||+++.|++++|+++++|||++++|++++++|.++++.+ +.
T Consensus 173 g~~~---~~~~~~~~l~~~l~~l~~~~iD~lILGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~v~~~L~~~~~~~~~~ 249 (286)
T 2jfq_A 173 MRYS---DPTITSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYT 249 (286)
T ss_dssp TCTT---CHHHHHHHHHHHHGGGTTCSCSEEEEESSSGGGGHHHHHHHTTTCSEEEEHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HCCC---CHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 1138---8889999999988886467898799888784889999999829998898878999999999998677554568
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCC
Q ss_conf 788779996699799999999856888
Q gi|254780905|r 244 VFDDHALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 244 ~~~~~~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
..++.+||+||+++.|.+.+.+|||.+
T Consensus 250 ~~~~~~f~tT~~~~~f~~~~~~~lg~~ 276 (286)
T 2jfq_A 250 EHPDHRFFATGDTTHITNIIKEWLNLS 276 (286)
T ss_dssp SSCCCEEEESSCCHHHHHHHHHHHCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCC
T ss_conf 998879998999899999999974999