HHsearch results for GI: 254780905 and protein with PDBid: 2jfz_A
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=100.00 E-value=0 Score=486.23 Aligned_cols=245 Identities=22% Similarity=0.290 Sum_probs=215.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
Q ss_conf 70798779105899999999689998999941578989898989999999999999862169848997176202633899
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~ 94 (271)
.|||||||+|||||+++|++++|+++|+|+||++|+|||+||+++|++++.++++++. +.++++|||||||||+.+++.
T Consensus 2 kIgvfDSGiGGlsvl~~l~~~lp~~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~l~-~~~~~~IVIACNTasa~al~~ 80 (255)
T 2jfz_A 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFK-PHEIELLIVACNTASALALEE 80 (255)
T ss_dssp EEEEEESSSTTHHHHHHHHHTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHG-GGCCSCEEECCHHHHHHTHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEECCCHHHHHHHHH
T ss_conf 8999928976799999999878999989994478999898999999999999999999-739998997576898975699
Q ss_pred HHHHCCCCCCCCCCHHHHHHHH---HCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9862577765445479999998---4078832998506773170168998512788579770564225787766426776
Q gi|254780905|r 95 LRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 (271)
Q Consensus 95 l~~~~~~ipiigii~~~~~a~~---~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~ 171 (271)
+|+.+ ++|++||++++.+++. .++.++||||||++|++|++|++++++. ++.+|..++|+.||++||++..+.
T Consensus 81 lr~~~-~ipiigvi~p~~~a~~~~~~~k~~~IgvlaT~~Ti~s~~y~~~i~~~-~~~~V~~~~~~~lv~~iE~~~~~~-- 156 (255)
T 2jfz_A 81 MQKYS-KIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQ-GYLNISHLATSLFVPLIEESILEG-- 156 (255)
T ss_dssp HHHHC-SSCEECSSHHHHHHHHHHCCCTTSCEEEEECHHHHHHTHHHHHHHHT-TCCCEEEEECTTHHHHHHTTCCSS--
T ss_pred HHHCC-CCCEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHHCCCC--
T ss_conf 88446-88667676306999999861368669998455575428999998526-771576047788999998541068--
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHC------CCCCEEEECHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 979999999998465410588789980563588999999864------89978982858999999999864273345778
Q gi|254780905|r 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 (271)
Q Consensus 172 ~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~------~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~ 245 (271)
+..+..++.++.++ ..++|++|||||||||+++.|++++ ++++.+|||++++|+++.+.+...+ ++...
T Consensus 157 --~~~~~~~~~~l~~l-~~~~D~lILGCTHyPll~~~i~~~~~~~v~l~~~~~~id~a~ava~~l~~~~~l~~--~~~~~ 231 (255)
T 2jfz_A 157 --ELLETCMHYYFTPL-EILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKN--NACTF 231 (255)
T ss_dssp --HHHHHHHHHHHTTC-CSCCSEEEEESTTGGGGHHHHHHHHHHHSCCSSCCEEEEHHHHHHHHHHHHTTCCS--CSCSS
T ss_pred --HHHHHHHHHHHHHH-HCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHC--CCCCC
T ss_conf --68999999996077-61698799917688889999999845680137886586519999999998762022--47899
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCC
Q ss_conf 877999669979999999985688
Q gi|254780905|r 246 DDHALFLSGKPDIAMRRLMQGFGL 269 (271)
Q Consensus 246 ~~~~f~~T~~~~~~~~~~~~~~G~ 269 (271)
++++||+||+++.|.+.+.+||.+
T Consensus 232 ~~~~f~~Tg~~~~f~~~a~~~L~~ 255 (255)
T 2jfz_A 232 PKVEFHASGDVIWLERQAKEWLKL 255 (255)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC
T ss_conf 865999898989999999998484