HHsearch results for GI: 254780905 and protein with PDBid: 3ojc_A
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=100.00 E-value=2.9e-37 Score=266.68 Aligned_cols=208 Identities=14% Similarity=0.124 Sum_probs=158.4
Q ss_pred CCEEEEECCCCHHHH------HHHHHHHCC----CCC----EEEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 870798779105899------999999689----998----9999415789--898989899999999999998621698
Q gi|254780905|r 14 NSILIFDSGIGGLIV------LQKMRFLMP----EYH----FIYVADDVGF--PYGNWEDHALKKRLMFLFSDILDKYQP 77 (271)
Q Consensus 14 ~~IgifDSGiGGLtv------~~~l~~~lP----~~~----~iY~~D~~~~--PYG~ks~~~I~~~~~~~~~~ll~k~~~ 77 (271)
+.||| +||+++ ++.|.+..| +++ ++|.+|..+. ||++++.+.+..+..+++.+|. +.||
T Consensus 3 k~IGI----iGGmgp~at~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~~g~ 77 (231)
T 3ojc_A 3 KILGL----IGGMSWESTIPYYRMINQHVKAQLGGLHSAKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLK-HAGA 77 (231)
T ss_dssp CCEEE----EECTTHHHHHHHHHHHHHHHHHHHCTTCCCCEEEEECCHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTC
T ss_pred CEEEE----ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HCCC
T ss_conf 76999----706388999999999999988754776786689953885321002346881069999999999999-7699
Q ss_pred CEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHH-CCCCCEEEECCCC
Q ss_conf 489971762026338999862577765445479999998407883299850677317016899851-2788579770564
Q gi|254780905|r 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS-YVSQCHIHLVSSM 156 (271)
Q Consensus 78 ~~IVIACNTasa~~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~-~~~~~~v~~~~~~ 156 (271)
++|||||||+|+.+ +.+++++ ++|++||++++..++..++.++||||||++|++|++|++.+.+ .+..+.+......
T Consensus 78 ~~iviaCNTah~~~-~~l~~~~-~ipii~ii~~~~~~~~~~~~~~IgvlaT~~T~~s~~Y~~~l~~~~~~~~~~p~~~~~ 155 (231)
T 3ojc_A 78 EVIVVCTNTMHKVA-DDIEAAC-GLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDR 155 (231)
T ss_dssp CEEEECSSGGGGGH-HHHHHHH-CSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTHHHHHHTTCCEEECCCHHHH
T ss_pred CEEEECCHHHHHHH-HHHHHHC-CCCCEECCHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCEECCCHHHH
T ss_conf 99997636889999-9999863-999545344799999974898679984473615588999999876994675789999
Q ss_pred C-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH
Q ss_conf 2-2578776642677697999999999846541058878998056358899999986489978982858999999999
Q gi|254780905|r 157 I-LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 (271)
Q Consensus 157 ~-lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~ 233 (271)
. ..+.+.+....+... +..+..+..++..+..+++|++||||||||++.+.+ ..++++|||++.+|+++.++
T Consensus 156 ~~~~~~i~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~d~iILGCTh~pl~~~~~----~~~~~~iD~~~~lA~~~v~~ 228 (231)
T 3ojc_A 156 EAVNRIIYEELCLGIIS-ETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQ----DASVPVFDTTAIHASAAADY 228 (231)
T ss_dssp HHHHHHHHHTGGGTCCC-HHHHHHHHHHHHHHHHTTCSCEEECSGGGGGTCCGG----GCSSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH----CCCCCEECCHHHHHHHHHHH
T ss_conf 99999999999828998-899999999999998589898998478877662234----28998875799999999999