HHSEARCH alignment of GI: 254780905 and SCOP domain: d1jfla2

Alignment
>d1jfla2 c.78.2.1 (A:116-228) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.76  E-value=2.8e-19  Score=145.54  Aligned_cols=110  Identities=14%  Similarity=0.013  Sum_probs=85.1

Q ss_pred             CCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf             88329985067731701689985127885797705642257877664267769799999999984654105887899805
Q gi|254780905|r  120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC  199 (271)
Q Consensus       120 ~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGC  199 (271)
                      .++||||||++|++|++|++.+++.+.++.+....++.++..+....... ......+..+..++.++..+++|++||||
T Consensus         1 ~krIGlLaT~~T~~s~~Y~~~l~~~g~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~g~d~iILGC   79 (113)
T d1jfla2           1 FKKAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKA-GNLKLGRELLLKTAKILEERGAECIIAGC   79 (113)
T ss_dssp             CSEEEEECCHHHHHHTHHHHHHHHTTCEEECCCHHHHHHHHHHHHTTGGG-TCHHHHHHHHHHHHHHHHHTTCSEEEECS
T ss_pred             CCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             98899981898985379999999724543375566788889999999704-66457789999995144217987799816


Q ss_pred             CCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH
Q ss_conf             63588999999864899789828589999999998
Q gi|254780905|r  200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL  234 (271)
Q Consensus       200 THyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L  234 (271)
                      ||||++.+.++    .++++|||++.+|+++.++.
T Consensus        80 Telpll~~~~~----~~~~~iD~~~~la~~~v~~a  110 (113)
T d1jfla2          80 TEVSVVLKQDD----LKVPLIDPMDVIAEVAVKVA  110 (113)
T ss_dssp             HHHHHHCCGGG----CSSCEECHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHC----CCCCEECCHHHHHHHHHHHH
T ss_conf             52898764204----89857874999999999998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/glutamate racemase
family: Aspartate/glutamate racemase
domain: Aspartate racemase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]