PSIBLAST alignment of GI: 254780905 and protein with PDB id: 2jfx
gi|151567728|pdb|2JFX|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate Length = 255
>gi|151567729|pdb|2JFX|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate Racemase In Complex With D-Glutamate Length = 255
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNISHLATSLFVPLIEESILEG-----ELLETCMHYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + N F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKN--NACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG R+ +
Sbjct: 233 KVEFHASGDVIWLERQAKEWL 253