RPSBLAST alignment of GI: 254780905 and protein with PDBid: 2jfz
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A* Length = 255
Score = 133 bits (335), Expect = 5e-32
Identities = 55/250 (22%), Positives = 92/250 (36%), Gaps = 17/250 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG VL+ + IY D PYG + + K+ D +
Sbjct: 3 IGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTI-KQFGLEALDFFKPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ L ++ACNTA L +E++ P+I + + I +L T AT++
Sbjct: 62 EIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQ 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
N + +I +++ + +EE E E+ + + +
Sbjct: 122 SNAYDNALKQQG-YLNISHLATSLFVPLIEESIL-----EGELLETCMHYYFTPLEILPE 175
Query: 194 VIVLACTHYPLIVHVFRQ------LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
VI+L CTH+PLI P P + + D+I + N T
Sbjct: 176 VIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTF--PK 233
Query: 248 HALFLSGKPD 257
SG
Sbjct: 234 VEFHASGDVI 243