RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780909|ref|YP_003065322.1| hypothetical protein CLIBASIA_04040 [Candidatus Liberibacter asiaticus str. psy62] (159 letters) >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 Score = 33.9 bits (76), Expect = 0.007 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 6/46 (13%) Query: 32 PQTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKII 77 ++L+ +L T+ AE A + A AA+ ++ Sbjct: 357 FESLSAALTTVLAPETRARAEAVAGMVL------TDGAAAAADLVL 396 >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 Score = 33.5 bits (75), Expect = 0.009 Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 6/45 (13%) Query: 32 PQTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKI 76 +L+ L + A A+ R A+ AA+ + Sbjct: 345 IDSLSAALDTALAPEIRARATTVADTIR------ADGTTVAAQLL 383 >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 Score = 30.1 bits (66), Expect = 0.098 Identities = 9/45 (20%), Positives = 13/45 (28%), Gaps = 1/45 (2%) Query: 32 PQTLAERGKALL-DEATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 +L+ L E +A A A AA A + Sbjct: 356 FDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400 >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 Score = 28.0 bits (61), Expect = 0.37 Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 9/41 (21%) Query: 45 EATQKAAEKAAEAARKAAEQA---------AEAAKKAAEKI 76 +++ E+ + K + +KAA+ I Sbjct: 48 SPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADII 88 Score = 28.0 bits (61), Expect = 0.46 Identities = 4/29 (13%), Positives = 8/29 (27%) Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAE 74 K +R+ E+ + K Sbjct: 38 IDLATIAKVISPSREEVERTLDVLFKRGR 66 >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} Length = 265 Score = 27.9 bits (60), Expect = 0.37 Identities = 6/32 (18%), Positives = 15/32 (46%) Query: 45 EATQKAAEKAAEAARKAAEQAAEAAKKAAEKI 76 E + ++A E +K + A+ A +++ Sbjct: 228 EGVTRNEKQAIENFKKGCKLGAKGACDILKQL 259 >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 Score = 28.2 bits (61), Expect = 0.37 Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 9/45 (20%) Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKII-HKD 80 T+ +AA AA K + A + A ++ D Sbjct: 22 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSD 66 Score = 25.5 bits (54), Expect = 2.1 Identities = 9/31 (29%), Positives = 10/31 (32%), Gaps = 1/31 (3%) Query: 46 ATQKA-AEKAAEAARKAAEQAAEAAKKAAEK 75 T +A QAA AA K A Sbjct: 11 FTGEALPLAFPVHTEVEVNQAATAAAKVARD 41 >d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375 Score = 28.1 bits (61), Expect = 0.41 Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 15/60 (25%) Query: 35 LAERGKALLDEATQKAAEKAAEAARK---------------AAEQAAEAAKKAAEKIIHK 79 ++ R + T + KA +K E E A + +K K Sbjct: 1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVK 60 >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 Score = 27.7 bits (60), Expect = 0.55 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 10/55 (18%) Query: 43 LDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKI----------IHKDKKKPKEN 87 L E +K E + +A KK AEK+ D +K +E Sbjct: 3 LLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARER 57 >d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow (Bos taurus), brain [TaxId: 9913]} Length = 400 Score = 26.9 bits (58), Expect = 0.93 Identities = 11/35 (31%), Positives = 15/35 (42%) Query: 49 KAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKK 83 + +EKAA AR +Q EK + KK Sbjct: 10 RVSEKAANIARACRQQETLFQLLIEEKKEGEKNKK 44 >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 Score = 26.8 bits (58), Expect = 0.97 Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 9/46 (19%) Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKII-HKDK 81 + + + +A+KA + A K A+ ++ K+K Sbjct: 35 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80 Score = 26.0 bits (56), Expect = 1.5 Identities = 6/40 (15%), Positives = 14/40 (35%) Query: 36 AERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 +E + + A+ + + + +AKKA Sbjct: 15 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA 54 >d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368 Score = 26.6 bits (57), Expect = 1.0 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 22 GQADPVAPPPPQTLAERGKALLDEATQKAAEKAAEAARKA 61 GQ P PPPP L E + L Q A A R+A Sbjct: 31 GQGFPSNPPPPF-LLEAVRRALGRQDQYAPPAGLPALREA 69 >d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]} Length = 213 Score = 26.4 bits (57), Expect = 1.2 Identities = 8/28 (28%), Positives = 16/28 (57%) Query: 36 AERGKALLDEATQKAAEKAAEAARKAAE 63 A KAL++ + A+K EA+++ + Sbjct: 176 AREEKALIEMLLKDDADKVLEASQEVTQ 203 >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 Score = 26.3 bits (57), Expect = 1.2 Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 8/40 (20%) Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKI 76 EA+ + + A AA A + AE K A+ I Sbjct: 35 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVI 74 Score = 25.5 bits (55), Expect = 2.0 Identities = 9/30 (30%), Positives = 14/30 (46%) Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 AT + AEA+ + + A AA A + Sbjct: 25 ATGDVLLEIAEASAEQVDAAVRAADAAFAE 54 >d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Length = 224 Score = 26.6 bits (58), Expect = 1.2 Identities = 12/62 (19%), Positives = 18/62 (29%) Query: 27 VAPPPPQTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKE 86 + PPPP + Q + E + AAE A ++ A E Sbjct: 24 LLPPPPAVGSIAFLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAFSGAFGSPITE 83 Query: 87 NQ 88 Sbjct: 84 KD 85 >d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382 Score = 26.3 bits (57), Expect = 1.2 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 15/62 (24%) Query: 33 QTLAERGKALLDEATQKAAEKAAEAARK---------------AAEQAAEAAKKAAEKII 77 + L+ R +A+ AT KA E R+ E EAA++A + Sbjct: 2 RGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK 61 Query: 78 HK 79 K Sbjct: 62 TK 63 >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 Score = 26.4 bits (57), Expect = 1.3 Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 A + A+A + AE A EAA KA + Sbjct: 60 APSEVVGTTAKAGKAEAEAALEAAWKAFKT 89 Score = 24.5 bits (52), Expect = 5.2 Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 45 EATQKAAEKAAEAARKAAE 63 +A + AE A EAA KA + Sbjct: 70 KAGKAEAEAALEAAWKAFK 88 >d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid dehydrogenase, PP module {Human (Homo sapiens) [TaxId: 9606]} Length = 395 Score = 26.0 bits (56), Expect = 1.4 Identities = 10/41 (24%), Positives = 16/41 (39%) Query: 40 KALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKD 80 + DE +KA K + A + AE K ++ D Sbjct: 321 QGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSD 361 >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 Score = 26.1 bits (57), Expect = 1.6 Identities = 8/31 (25%), Positives = 15/31 (48%) Query: 45 EATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 E ++ +KA +AAR A + + + A Sbjct: 47 EGDKEDVDKAVKAARAAFQLGSPWRRMDASH 77 Score = 24.2 bits (52), Expect = 5.2 Identities = 7/45 (15%), Positives = 19/45 (42%) Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEV 90 +T + + AE ++ ++A +AA+ A + + + Sbjct: 37 STGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL 81 >d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus musculus) [TaxId: 10090]} Length = 137 Score = 25.8 bits (56), Expect = 1.8 Identities = 10/41 (24%), Positives = 14/41 (34%) Query: 48 QKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQ 88 A + RKA E A+ A K + E+Q Sbjct: 74 NLATFNKLVSYRKAMYHTLEKARVRAGKTFSSSPGESLEDQ 114 >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 Score = 25.8 bits (56), Expect = 2.0 Identities = 8/31 (25%), Positives = 16/31 (51%) Query: 45 EATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 E ++ +KA +AAR+A + + A + Sbjct: 47 EGDKEDVDKAVKAARQAFQIGSPWRTMDASE 77 Score = 24.6 bits (53), Expect = 3.8 Identities = 8/45 (17%), Positives = 20/45 (44%) Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEV 90 AT++ + E ++ ++A +AA++A + E + Sbjct: 37 ATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRL 81 >d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 272 Score = 25.8 bits (55), Expect = 2.1 Identities = 9/37 (24%), Positives = 14/37 (37%) Query: 48 QKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKP 84 Q+ + A AR+A E EA K ++ Sbjct: 2 QECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDL 38 >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 Score = 25.4 bits (55), Expect = 2.3 Identities = 7/30 (23%), Positives = 14/30 (46%) Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75 AT + + + +QA ++A+ A K Sbjct: 44 ATGRVLCQMVPCGAEEVDQAVQSAQAAYLK 73 Score = 25.4 bits (55), Expect = 2.6 Identities = 6/40 (15%), Positives = 15/40 (37%), Gaps = 8/40 (20%) Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKI 76 + ++A ++A+ A + + +AA I Sbjct: 54 PCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93 >d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]} Length = 140 Score = 25.4 bits (55), Expect = 2.4 Identities = 9/45 (20%), Positives = 17/45 (37%) Query: 34 TLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIH 78 L E+ + L+ E + + E + + E K K+ H Sbjct: 91 KLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEH 135 >d1xrsa_ c.1.19.4 (A:) D-lysine 5,6-aminomutase alpha subunit, KamD {Clostridium sticklandii [TaxId: 1511]} Length = 516 Score = 25.1 bits (55), Expect = 3.0 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 6/60 (10%) Query: 32 PQTLAER---GKALLDEATQKAAEKAAEAARKAAEQAAE---AAKKAAEKIIHKDKKKPK 85 PQ +A+ G+ L + K + A A++ E + E + K Sbjct: 91 PQEIAQAISAGELDLTKLPMKDLFEVKTKALSMAKETVEKIKNNRSIRESRFEEYGDKSG 150 >d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP module {Pseudomonas putida [TaxId: 303]} Length = 407 Score = 25.2 bits (54), Expect = 3.1 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%) Query: 33 QTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAE 74 Q L + G E +A EAA AA++ AE A Sbjct: 340 QHLIKIG--HWSEEEHQATTAEFEAAVIAAQKEAEQYGTLAN 379 >d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2 {Staphylococcus aureus [TaxId: 1280]} Length = 400 Score = 25.1 bits (53), Expect = 3.1 Identities = 3/27 (11%), Positives = 9/27 (33%) Query: 43 LDEATQKAAEKAAEAARKAAEQAAEAA 69 +D+ QK + + + + Sbjct: 43 MDKDVQKTLQNDVDNGSFYKNKDQQVG 69 >d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 304 Score = 25.0 bits (53), Expect = 3.2 Identities = 15/113 (13%), Positives = 24/113 (21%), Gaps = 22/113 (19%) Query: 52 EKAAEAARKAAEQAAE--------------------AAKKAAEKIIHK--DKKKPKENQE 89 A A+KA A + + I +K PK Sbjct: 9 ASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTII 68 Query: 90 VNEVPVAANIEPESQETQQQVINKTTTSQTDAEKTPNEKRQGTTDGINNQSNA 142 E ++ E E Q + E D ++ Sbjct: 69 GEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEY 121 >d1oaha_ a.138.1.3 (A:) Cytochrome c nitrite reductase {Desulfovibrio desulfuricans [TaxId: 876]} Length = 482 Score = 25.0 bits (54), Expect = 3.3 Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 2/76 (2%) Query: 53 KAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEVNEVPVAANIEPESQETQQQVIN 112 + E ++KA + A EA + D KK + + +PE + Sbjct: 408 TSMECSQKAVDLATEATDFGIAPALAGDIKKL--VPPILTLSRKLQQDPEFLKQNPWTRL 465 Query: 113 KTTTSQTDAEKTPNEK 128 + + ++ Sbjct: 466 LPALPKAEQVWEGQDR 481 >d1vdwa_ e.7.1.1 (A:) Archaeal inositol monophosphatase/fructose-1,6-bisphosphatase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 253 Score = 25.0 bits (53), Expect = 3.4 Identities = 11/61 (18%), Positives = 12/61 (19%), Gaps = 22/61 (36%) Query: 49 KAAEKAA-EAARKAAEQAAE---------------------AAKKAAEKIIHKDKKKPKE 86 K K A + R K AE II K Sbjct: 3 KTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLGV 62 Query: 87 N 87 N Sbjct: 63 N 63 Score = 23.8 bits (50), Expect = 7.2 Identities = 6/35 (17%), Positives = 12/35 (34%), Gaps = 4/35 (11%) Query: 56 EAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEV 90 + RK A + + I PK ++ + Sbjct: 3 KTWRKIAIDII----RDFDHNIMPLFGNPKASETI 33 >d2p12a1 b.175.1.1 (A:8-172) Hypothetical protein RHA1_ro00977 {Rhodococcus sp. RHA1 [TaxId: 101510]} Length = 165 Score = 24.8 bits (54), Expect = 4.2 Identities = 11/35 (31%), Positives = 12/35 (34%) Query: 42 LLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKI 76 LLD A AEQA A A + I Sbjct: 110 LLDVDELMEAHTTGLLDTATAEQAILTATTAIDGI 144 >d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]} Length = 140 Score = 24.6 bits (53), Expect = 4.8 Identities = 7/50 (14%), Positives = 18/50 (36%) Query: 34 TLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKK 83 L E+GK + E K +E+ + + +++ ++ Sbjct: 91 VLTEKGKEIFGEILSNFESLLKSVLEKFSEEDFKVVSEGFNRMVEALSRE 140 >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} Length = 133 Score = 24.3 bits (51), Expect = 5.2 Identities = 11/91 (12%), Positives = 22/91 (24%) Query: 52 EKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEVNEVPVAANIEPESQETQQQVI 111 +KA + KA E + +K+K + + N + + Sbjct: 10 KKAIQYYVKACELNEMFGCLSLVSNSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGK 69 Query: 112 NKTTTSQTDAEKTPNEKRQGTTDGINNQSNA 142 + A+ DG Sbjct: 70 YVKKDLRKAAQYYSKACGLNDQDGCLILGYK 100 >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 Score = 24.0 bits (51), Expect = 6.3 Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 4/46 (8%) Query: 48 QKAAEKAAEAARKAA----EQAAEAAKKAAEKIIHKDKKKPKENQE 89 Q+ A+ A +A E ++ K + + + N+ Sbjct: 6 QQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKI 51 >d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]} Length = 141 Score = 23.8 bits (51), Expect = 7.2 Identities = 5/44 (11%), Positives = 11/44 (25%) Query: 34 TLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKII 77 L + G A+ A + E ++ + Sbjct: 95 FLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCL 138 >d1v7za_ c.125.1.1 (A:) Creatininase {Pseudomonas putida [TaxId: 303]} Length = 257 Score = 23.6 bits (50), Expect = 7.6 Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 36 AERGKALLDEATQKAAEKAAEA 57 E+G+ +L+ Q A+ E Sbjct: 233 REKGELILEVCVQGIADAIREE 254 >d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Score = 23.7 bits (50), Expect = 8.4 Identities = 9/48 (18%), Positives = 17/48 (35%) Query: 52 EKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEVNEVPVAANI 99 + A A A ++ K + + + + +N V ANI Sbjct: 70 KSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANI 117 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.299 0.115 0.295 Gapped Lambda K H 0.267 0.0547 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 484,609 Number of extensions: 19508 Number of successful extensions: 192 Number of sequences better than 10.0: 1 Number of HSP's gapped: 184 Number of HSP's successfully gapped: 92 Length of query: 159 Length of database: 2,407,596 Length adjustment: 78 Effective length of query: 81 Effective length of database: 1,336,656 Effective search space: 108269136 Effective search space used: 108269136 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.7 bits) S2: 49 (23.1 bits)