RPS-BLAST 2.2.22 [Sep-27-2009]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= gi|254780909|ref|YP_003065322.1| hypothetical protein
CLIBASIA_04040 [Candidatus Liberibacter asiaticus str. psy62]
(159 letters)
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 33.9 bits (76), Expect = 0.007
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 32 PQTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKII 77
++L+ +L T+ AE A + A AA+ ++
Sbjct: 357 FESLSAALTTVLAPETRARAEAVAGMVL------TDGAAAAADLVL 396
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 33.5 bits (75), Expect = 0.009
Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 32 PQTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKI 76
+L+ L + A A+ R A+ AA+ +
Sbjct: 345 IDSLSAALDTALAPEIRARATTVADTIR------ADGTTVAAQLL 383
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 30.1 bits (66), Expect = 0.098
Identities = 9/45 (20%), Positives = 13/45 (28%), Gaps = 1/45 (2%)
Query: 32 PQTLAERGKALL-DEATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
+L+ L E +A A A AA A +
Sbjct: 356 FDSLSAALATALTPETHARATAVAGTIRTDGAAVAARLLLDAVSR 400
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating
glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon
Thermoproteus tenax [TaxId: 2271]}
Length = 499
Score = 28.0 bits (61), Expect = 0.37
Identities = 6/41 (14%), Positives = 14/41 (34%), Gaps = 9/41 (21%)
Query: 45 EATQKAAEKAAEAARKAAEQA---------AEAAKKAAEKI 76
+++ E+ + K + +KAA+ I
Sbjct: 48 SPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADII 88
Score = 28.0 bits (61), Expect = 0.46
Identities = 4/29 (13%), Positives = 8/29 (27%)
Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAE 74
K +R+ E+ + K
Sbjct: 38 IDLATIAKVISPSREEVERTLDVLFKRGR 66
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC)
{Helicobacter pylori [TaxId: 210]}
Length = 265
Score = 27.9 bits (60), Expect = 0.37
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 45 EATQKAAEKAAEAARKAAEQAAEAAKKAAEKI 76
E + ++A E +K + A+ A +++
Sbjct: 228 EGVTRNEKQAIENFKKGCKLGAKGACDILKQL 259
>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Vibrio harveyi [TaxId: 669]}
Length = 504
Score = 28.2 bits (61), Expect = 0.37
Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 9/45 (20%)
Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKII-HKD 80
T+ +AA AA K + A + A ++ D
Sbjct: 22 VHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSD 66
Score = 25.5 bits (54), Expect = 2.1
Identities = 9/31 (29%), Positives = 10/31 (32%), Gaps = 1/31 (3%)
Query: 46 ATQKA-AEKAAEAARKAAEQAAEAAKKAAEK 75
T +A QAA AA K A
Sbjct: 11 FTGEALPLAFPVHTEVEVNQAATAAAKVARD 41
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga
maritima [TaxId: 2336]}
Length = 375
Score = 28.1 bits (61), Expect = 0.41
Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 15/60 (25%)
Query: 35 LAERGKALLDEATQKAAEKAAEAARK---------------AAEQAAEAAKKAAEKIIHK 79
++ R + T + KA +K E E A + +K K
Sbjct: 1 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVK 60
>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 414
Score = 27.7 bits (60), Expect = 0.55
Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 10/55 (18%)
Query: 43 LDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKI----------IHKDKKKPKEN 87
L E +K E + +A KK AEK+ D +K +E
Sbjct: 3 LLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARER 57
>d1inpa_ e.7.1.1 (A:) Inositol polyphosphate 1-phosphatase {Cow
(Bos taurus), brain [TaxId: 9913]}
Length = 400
Score = 26.9 bits (58), Expect = 0.93
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 49 KAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKK 83
+ +EKAA AR +Q EK + KK
Sbjct: 10 RVSEKAANIARACRQQETLFQLLIEEKKEGEKNKK 44
>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Streptococcus mutans [TaxId: 1309]}
Length = 474
Score = 26.8 bits (58), Expect = 0.97
Identities = 8/46 (17%), Positives = 18/46 (39%), Gaps = 9/46 (19%)
Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKII-HKDK 81
+ + + +A+KA + A K A+ ++ K+K
Sbjct: 35 AMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80
Score = 26.0 bits (56), Expect = 1.5
Identities = 6/40 (15%), Positives = 14/40 (35%)
Query: 36 AERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
+E + + A+ + + + +AKKA
Sbjct: 15 SENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPA 54
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 26.6 bits (57), Expect = 1.0
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 22 GQADPVAPPPPQTLAERGKALLDEATQKAAEKAAEAARKA 61
GQ P PPPP L E + L Q A A R+A
Sbjct: 31 GQGFPSNPPPPF-LLEAVRRALGRQDQYAPPAGLPALREA 69
>d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia
trachomatis [TaxId: 813]}
Length = 213
Score = 26.4 bits (57), Expect = 1.2
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 36 AERGKALLDEATQKAAEKAAEAARKAAE 63
A KAL++ + A+K EA+++ +
Sbjct: 176 AREEKALIEMLLKDDADKVLEASQEVTQ 203
>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase
YdcW {Escherichia coli [TaxId: 562]}
Length = 474
Score = 26.3 bits (57), Expect = 1.2
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 8/40 (20%)
Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKI 76
EA+ + + A AA A + AE K A+ I
Sbjct: 35 EASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVI 74
Score = 25.5 bits (55), Expect = 2.0
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
AT + AEA+ + + A AA A +
Sbjct: 25 ATGDVLLEIAEASAEQVDAAVRAADAAFAE 54
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia
blattae [TaxId: 563]}
Length = 224
Score = 26.6 bits (58), Expect = 1.2
Identities = 12/62 (19%), Positives = 18/62 (29%)
Query: 27 VAPPPPQTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKE 86
+ PPPP + Q + E + AAE A ++ A E
Sbjct: 24 LLPPPPAVGSIAFLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAFSGAFGSPITE 83
Query: 87 NQ 88
Sbjct: 84 KD 85
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus
thermophilus [TaxId: 274]}
Length = 382
Score = 26.3 bits (57), Expect = 1.2
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 15/62 (24%)
Query: 33 QTLAERGKALLDEATQKAAEKAAEAARK---------------AAEQAAEAAKKAAEKII 77
+ L+ R +A+ AT KA E R+ E EAA++A +
Sbjct: 2 RGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK 61
Query: 78 HK 79
K
Sbjct: 62 TK 63
>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase
{Thermus thermophilus [TaxId: 274]}
Length = 516
Score = 26.4 bits (57), Expect = 1.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
A + A+A + AE A EAA KA +
Sbjct: 60 APSEVVGTTAKAGKAEAEAALEAAWKAFKT 89
Score = 24.5 bits (52), Expect = 5.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 45 EATQKAAEKAAEAARKAAE 63
+A + AE A EAA KA +
Sbjct: 70 KAGKAEAEAALEAAWKAFK 88
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid
dehydrogenase, PP module {Human (Homo sapiens) [TaxId:
9606]}
Length = 395
Score = 26.0 bits (56), Expect = 1.4
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 40 KALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKD 80
+ DE +KA K + A + AE K ++ D
Sbjct: 321 QGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSD 361
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Length = 494
Score = 26.1 bits (57), Expect = 1.6
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 45 EATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
E ++ +KA +AAR A + + + A
Sbjct: 47 EGDKEDVDKAVKAARAAFQLGSPWRRMDASH 77
Score = 24.2 bits (52), Expect = 5.2
Identities = 7/45 (15%), Positives = 19/45 (42%)
Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEV 90
+T + + AE ++ ++A +AA+ A + + +
Sbjct: 37 STGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL 81
>d1khca_ b.34.9.2 (A:) DNA methyltransferase DNMT3B {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 137
Score = 25.8 bits (56), Expect = 1.8
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 48 QKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQ 88
A + RKA E A+ A K + E+Q
Sbjct: 74 NLATFNKLVSYRKAMYHTLEKARVRAGKTFSSSPGESLEDQ 114
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 25.8 bits (56), Expect = 2.0
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 45 EATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
E ++ +KA +AAR+A + + A +
Sbjct: 47 EGDKEDVDKAVKAARQAFQIGSPWRTMDASE 77
Score = 24.6 bits (53), Expect = 3.8
Identities = 8/45 (17%), Positives = 20/45 (44%)
Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEV 90
AT++ + E ++ ++A +AA++A + E +
Sbjct: 37 ATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRL 81
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 272
Score = 25.8 bits (55), Expect = 2.1
Identities = 9/37 (24%), Positives = 14/37 (37%)
Query: 48 QKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKP 84
Q+ + A AR+A E EA K ++
Sbjct: 2 QECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDL 38
>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Baltic cod (Gadus callarias) [TaxId: 8053]}
Length = 503
Score = 25.4 bits (55), Expect = 2.3
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 46 ATQKAAEKAAEAARKAAEQAAEAAKKAAEK 75
AT + + + +QA ++A+ A K
Sbjct: 44 ATGRVLCQMVPCGAEEVDQAVQSAQAAYLK 73
Score = 25.4 bits (55), Expect = 2.6
Identities = 6/40 (15%), Positives = 15/40 (37%), Gaps = 8/40 (20%)
Query: 45 EATQKAAEKAAEAARKA--------AEQAAEAAKKAAEKI 76
+ ++A ++A+ A + + +AA I
Sbjct: 54 PCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARII 93
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA
{Salmonella typhimurium [TaxId: 90371]}
Length = 140
Score = 25.4 bits (55), Expect = 2.4
Identities = 9/45 (20%), Positives = 17/45 (37%)
Query: 34 TLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIH 78
L E+ + L+ E + + E + + E K K+ H
Sbjct: 91 KLTEKAEPLIAEMEEVIHKTRGEILAGISSEEIELLIKLIAKLEH 135
>d1xrsa_ c.1.19.4 (A:) D-lysine 5,6-aminomutase alpha subunit, KamD
{Clostridium sticklandii [TaxId: 1511]}
Length = 516
Score = 25.1 bits (55), Expect = 3.0
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Query: 32 PQTLAER---GKALLDEATQKAAEKAAEAARKAAEQAAE---AAKKAAEKIIHKDKKKPK 85
PQ +A+ G+ L + K + A A++ E + E + K
Sbjct: 91 PQEIAQAISAGELDLTKLPMKDLFEVKTKALSMAKETVEKIKNNRSIRESRFEEYGDKSG 150
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP
module {Pseudomonas putida [TaxId: 303]}
Length = 407
Score = 25.2 bits (54), Expect = 3.1
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 33 QTLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAE 74
Q L + G E +A EAA AA++ AE A
Sbjct: 340 QHLIKIG--HWSEEEHQATTAEFEAAVIAAQKEAEQYGTLAN 379
>d2olua2 e.3.1.1 (A:293-692) Penicillin-binding protein 2, PBP2
{Staphylococcus aureus [TaxId: 1280]}
Length = 400
Score = 25.1 bits (53), Expect = 3.1
Identities = 3/27 (11%), Positives = 9/27 (33%)
Query: 43 LDEATQKAAEKAAEAARKAAEQAAEAA 69
+D+ QK + + + +
Sbjct: 43 MDKDVQKTLQNDVDNGSFYKNKDQQVG 69
>d1jp4a_ e.7.1.1 (A:) PIPase {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 304
Score = 25.0 bits (53), Expect = 3.2
Identities = 15/113 (13%), Positives = 24/113 (21%), Gaps = 22/113 (19%)
Query: 52 EKAAEAARKAAEQAAE--------------------AAKKAAEKIIHK--DKKKPKENQE 89
A A+KA A + + I +K PK
Sbjct: 9 ASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTII 68
Query: 90 VNEVPVAANIEPESQETQQQVINKTTTSQTDAEKTPNEKRQGTTDGINNQSNA 142
E ++ E E Q + E D ++
Sbjct: 69 GEEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEY 121
>d1oaha_ a.138.1.3 (A:) Cytochrome c nitrite reductase
{Desulfovibrio desulfuricans [TaxId: 876]}
Length = 482
Score = 25.0 bits (54), Expect = 3.3
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Query: 53 KAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEVNEVPVAANIEPESQETQQQVIN 112
+ E ++KA + A EA + D KK + + +PE +
Sbjct: 408 TSMECSQKAVDLATEATDFGIAPALAGDIKKL--VPPILTLSRKLQQDPEFLKQNPWTRL 465
Query: 113 KTTTSQTDAEKTPNEK 128
+ + ++
Sbjct: 466 LPALPKAEQVWEGQDR 481
>d1vdwa_ e.7.1.1 (A:) Archaeal inositol
monophosphatase/fructose-1,6-bisphosphatase {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 253
Score = 25.0 bits (53), Expect = 3.4
Identities = 11/61 (18%), Positives = 12/61 (19%), Gaps = 22/61 (36%)
Query: 49 KAAEKAA-EAARKAAEQAAE---------------------AAKKAAEKIIHKDKKKPKE 86
K K A + R K AE II K
Sbjct: 3 KTWRKIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDLGV 62
Query: 87 N 87
N
Sbjct: 63 N 63
Score = 23.8 bits (50), Expect = 7.2
Identities = 6/35 (17%), Positives = 12/35 (34%), Gaps = 4/35 (11%)
Query: 56 EAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEV 90
+ RK A + + I PK ++ +
Sbjct: 3 KTWRKIAIDII----RDFDHNIMPLFGNPKASETI 33
>d2p12a1 b.175.1.1 (A:8-172) Hypothetical protein RHA1_ro00977
{Rhodococcus sp. RHA1 [TaxId: 101510]}
Length = 165
Score = 24.8 bits (54), Expect = 4.2
Identities = 11/35 (31%), Positives = 12/35 (34%)
Query: 42 LLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKI 76
LLD A AEQA A A + I
Sbjct: 110 LLDVDELMEAHTTGLLDTATAEQAILTATTAIDGI 144
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator
TM0816 {Thermotoga maritima [TaxId: 2336]}
Length = 140
Score = 24.6 bits (53), Expect = 4.8
Identities = 7/50 (14%), Positives = 18/50 (36%)
Query: 34 TLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKIIHKDKKK 83
L E+GK + E K +E+ + + +++ ++
Sbjct: 91 VLTEKGKEIFGEILSNFESLLKSVLEKFSEEDFKVVSEGFNRMVEALSRE 140
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB)
{Helicobacter pylori [TaxId: 210]}
Length = 133
Score = 24.3 bits (51), Expect = 5.2
Identities = 11/91 (12%), Positives = 22/91 (24%)
Query: 52 EKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEVNEVPVAANIEPESQETQQQVI 111
+KA + KA E + +K+K + + N + +
Sbjct: 10 KKAIQYYVKACELNEMFGCLSLVSNSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGK 69
Query: 112 NKTTTSQTDAEKTPNEKRQGTTDGINNQSNA 142
+ A+ DG
Sbjct: 70 YVKKDLRKAAQYYSKACGLNDQDGCLILGYK 100
>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 436
Score = 24.0 bits (51), Expect = 6.3
Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 4/46 (8%)
Query: 48 QKAAEKAAEAARKAA----EQAAEAAKKAAEKIIHKDKKKPKENQE 89
Q+ A+ A +A E ++ K + + + N+
Sbjct: 6 QQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKI 51
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 141
Score = 23.8 bits (51), Expect = 7.2
Identities = 5/44 (11%), Positives = 11/44 (25%)
Query: 34 TLAERGKALLDEATQKAAEKAAEAARKAAEQAAEAAKKAAEKII 77
L + G A+ A + E ++ +
Sbjct: 95 FLTDEGLAIHQHAEAIMSRVHDELFAPLTPVEQATLVHLLDQCL 138
>d1v7za_ c.125.1.1 (A:) Creatininase {Pseudomonas putida [TaxId:
303]}
Length = 257
Score = 23.6 bits (50), Expect = 7.6
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 36 AERGKALLDEATQKAAEKAAEA 57
E+G+ +L+ Q A+ E
Sbjct: 233 REKGELILEVCVQGIADAIREE 254
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli
[TaxId: 562]}
Length = 459
Score = 23.7 bits (50), Expect = 8.4
Identities = 9/48 (18%), Positives = 17/48 (35%)
Query: 52 EKAAEAARKAAEQAAEAAKKAAEKIIHKDKKKPKENQEVNEVPVAANI 99
+ A A A ++ K + + + + +N V ANI
Sbjct: 70 KSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANI 117
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.299 0.115 0.295
Gapped
Lambda K H
0.267 0.0547 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 484,609
Number of extensions: 19508
Number of successful extensions: 192
Number of sequences better than 10.0: 1
Number of HSP's gapped: 184
Number of HSP's successfully gapped: 92
Length of query: 159
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 81
Effective length of database: 1,336,656
Effective search space: 108269136
Effective search space used: 108269136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 49 (23.1 bits)