HHsearch alignment for GI: 254780911 and conserved domain: PRK10820
>PRK10820 DNA-binding transcriptional regulator TyrR; Provisional.
Probab=95.95 E-value=0.024 Score=37.24 Aligned_cols=105 Identities=16% Similarity=0.269 Sum_probs=69.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCC
Q ss_conf 99998599876688899999857981897344432436889999999728852777988898740023202012445655
Q gi|254780911|r 5 ILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLDTSKLFMRISFVFNTCMKLFIADFQPIVQQFSLQYSIRNTKEAT 84 (288)
Q Consensus 5 iLti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~~~~~FFmRi~f~~~~~~~~l~~~f~~ia~~~~m~~~i~~~~~~~ 84 (288)
T Consensus 2 rlei~c~DRvGi~~dil~~l~~~~idl~~iEv~--~-~~~iyl--~~~~-~~~----~~~~~l~~~ir---~i~gv~~v~ 68 (513)
T PRK10820 2 RLEVFCEDRLGLTRELLDLLVLRSIDLRGIEID--P-IGRIYL--NFAE-LEF----ESFSSLMAEIR---RIAGVTDVR 68 (513)
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEC--C-CCEEEE--ECCC-CCH----HHHHHHHHHHH---CCCCCCEEE
T ss_conf 269995155635999999999769883699972--6-883899--7786-687----88999999985---489854367
Q ss_pred CEEEEECCCCCC-HHHHHHHHCCCCCEEEEEEEE--ECCHH
Q ss_conf 389997088679-899998620467415899999--77346
Q gi|254780911|r 85 KTLILVSQPDHC-LNDLLYRWNIGTLALNIVGVV--SNHTT 122 (288)
Q Consensus 85 riailvSg~gsn-L~~Ll~~~~~g~L~~eI~~VI--SN~~d 122 (288)
T Consensus 69 ~v~~mP~Er~~~~L~alLdsl~dgV~svD~~G~I~~~N~aa 109 (513)
T PRK10820 69 TVPWMPSEREHLALSALLEALPEPVLSIDMKSKVELANPAS 109 (513)
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEHHHH
T ss_conf 76048604688899999973899789985998199763999