HHsearch alignment for GI: 254780911 and conserved domain: cd04886
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. This CD includes the C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. The Escherichia coli tdcB gene product, ThrD-II, anaerobically catalyzes the pyridoxal phosphate-dependent dehydration of L-threonine and L-serine to ammonia and to alpha-ketobutyrate and pyruvate, respectively. Tetrameric ThrD-II is subject to allosteric activation by AMP, inhibition by alpha-keto acids, and catabolite inactivation by several metabolites of glycolysis and the citric acid cycle. Also included in this CD are N-terminal ACT domains present in smaller (~170 a.a.) archaeal proteins of unknown function. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=96.72 E-value=0.01 Score=39.72 Aligned_cols=61 Identities=11% Similarity=0.114 Sum_probs=43.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEE-CCCCCEEEEEEEEECCCC-HHHHHHHHHH
Q ss_conf 999859987668889999985798189734443-243688999999972885-2777988898
Q gi|254780911|r 6 LTITCPSNEEITSIIPDYLSTQGCNILDISQFN-DLDTSKLFMRISFVFNTC-MKLFIADFQP 66 (288)
Q Consensus 6 Lti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~-D~~~~~FFmRi~f~~~~~-~~~l~~~f~~ 66 (288)
T Consensus 1 l~v~i~D~PG~L~~l~~~ia~~gaNI~~i~H~R~~~~~~~~~~~v~i~~Et~~~eh~~~i~~~ 63 (73)
T cd04886 1 LRVELPDRPGQLAKLLAVIAEAGANIIEVSHDRAFKTLPLGEVEVELTLETRGAEHIEEIIAA 63 (73)
T ss_pred CEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHH
T ss_conf 989934898179999999998698289999986458898876999999984999999999999