HHsearch alignment for GI: 254780911 and conserved domain: cd04899

>cd04899 ACT_ACR-UUR-like_2 C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains. This ACT domain family, ACT_ACR-UUR-like_2, includes the second of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD; including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic, nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD are the second and fourth ACT domains of a novel protein composed almost entirely of ACT domain repeats, the ACR protein. These ACR proteins, found in Arabidopsis and Oryza, are proposed to function as novel regulatory or sensor proteins in plants. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=96.55  E-value=0.011  Score=39.58  Aligned_cols=54  Identities=11%  Similarity=0.057  Sum_probs=40.9

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEE--CCCCCEEEEEEEEECCCCHH
Q ss_conf             9999859987668889999985798189734443--24368899999997288527
Q gi|254780911|r    5 ILTITCPSNEEITSIIPDYLSTQGCNILDISQFN--DLDTSKLFMRISFVFNTCMK   58 (288)
Q Consensus         5 iLti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~--D~~~~~FFmRi~f~~~~~~~   58 (288)
T Consensus         2 vieV~~~DrpGLL~~i~~~l~~~~l~I~~A~I~T~g~~v~D~FyV~d~~g~~~~~~   57 (70)
T cd04899           2 VLELTALDRPGLLADVTRVLAELGLNIHSAKIATLGERAEDVFYVTDADGQPLDPE   57 (70)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCHH
T ss_conf             89999789555999999999988938999999840998999999989998929999