HHsearch alignment for GI: 254780911 and conserved domain: cd04900

>cd04900 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains. This ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD; including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic, nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD is the N-terminal ACT domain of a yet characterized Arabidopsis/Oryza predicted tyrosine kinase. Members of this CD belong to the superfamily of ACT regulatory domains.

Probab=96.20  E-value=0.025  Score=37.04  Aligned_cols=43  Identities=26%  Similarity=0.330  Sum_probs=36.3

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCC---CEEEEE
Q ss_conf             9998599876688899999857981897344432436---889999
Q gi|254780911|r    6 LTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLDT---SKLFMR   48 (288)
Q Consensus         6 Lti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~~~---~~FFmR   48 (288)
T Consensus         4 i~v~~~Dr~gLf~~i~~~l~~~~l~I~~A~I~t~~~g~~~D~F~V~   49 (73)
T cd04900           4 VFIYTPDRPGLFARIAGALDQLGLNILDARIFTTRDGYALDTFVVL   49 (73)
T ss_pred             EEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEE
T ss_conf             9999689787899999999988985999999985898699999998