HHsearch results for GI: 254780911 and protein with PDBid: 1u8s_A

>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.88  E-value=1.5e-08  Score=78.95  Aligned_cols=83  Identities=10%  Similarity=0.182  Sum_probs=70.5

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECC------CCCEEEEEEEEECC--CCHHHHHHHHHHHHCCCCCC
Q ss_conf             49999985998766888999998579818973444324------36889999999728--85277798889874002320
Q gi|254780911|r    3 SYILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDL------DTSKLFMRISFVFN--TCMKLFIADFQPIVQQFSLQ   74 (288)
Q Consensus         3 ~~iLti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~------~~~~FFmRi~f~~~--~~~~~l~~~f~~ia~~~~m~   74 (288)
                      .|.+++.|+|++||+++||++|++.|.||.++...+..      ....|.|.+++...  .+.+.+++.|..++++++++
T Consensus        93 ~~~v~v~g~DrpGlL~~It~~la~~~inI~~l~~~t~~~~~~~~~~~~f~~~~~i~vp~~~d~~~l~~~L~~L~~el~vD  172 (192)
T 1u8s_A           93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALDVQ  172 (192)
T ss_dssp             EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHHHHHTCE
T ss_pred             EEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCE
T ss_conf             69999995176268999999998679970058998426776677785799999995799999999999999999985967


Q ss_pred             EECCCCCCCCC
Q ss_conf             20124456553
Q gi|254780911|r   75 YSIRNTKEATK   85 (288)
Q Consensus        75 ~~i~~~~~~~r   85 (288)
                      +.+......++
T Consensus       173 i~i~~~~~~~~  183 (192)
T 1u8s_A          173 GSLNFIKNSQE  183 (192)
T ss_dssp             EEEEEEEC---
T ss_pred             EEEEECCCCCC
T ss_conf             99997647512