HHsearch results for GI: 254780911 and protein with PDBid: 1u8s_A
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.88 E-value=1.5e-08 Score=78.95 Aligned_cols=83 Identities=10% Similarity=0.182 Sum_probs=70.5
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECC------CCCEEEEEEEEECC--CCHHHHHHHHHHHHCCCCCC
Q ss_conf 49999985998766888999998579818973444324------36889999999728--85277798889874002320
Q gi|254780911|r 3 SYILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDL------DTSKLFMRISFVFN--TCMKLFIADFQPIVQQFSLQ 74 (288)
Q Consensus 3 ~~iLti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~------~~~~FFmRi~f~~~--~~~~~l~~~f~~ia~~~~m~ 74 (288)
.|.+++.|+|++||+++||++|++.|.||.++...+.. ....|.|.+++... .+.+.+++.|..++++++++
T Consensus 93 ~~~v~v~g~DrpGlL~~It~~la~~~inI~~l~~~t~~~~~~~~~~~~f~~~~~i~vp~~~d~~~l~~~L~~L~~el~vD 172 (192)
T 1u8s_A 93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALDVQ 172 (192)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHHHHHTCE
T ss_pred EEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCE
T ss_conf 69999995176268999999998679970058998426776677785799999995799999999999999999985967
Q ss_pred EECCCCCCCCC
Q ss_conf 20124456553
Q gi|254780911|r 75 YSIRNTKEATK 85 (288)
Q Consensus 75 ~~i~~~~~~~r 85 (288)
+.+......++
T Consensus 173 i~i~~~~~~~~ 183 (192)
T 1u8s_A 173 GSLNFIKNSQE 183 (192)
T ss_dssp EEEEEEEC---
T ss_pred EEEEECCCCCC
T ss_conf 99997647512