HHsearch results for GI: 254780911 and protein with PDBid: 2nyi_A
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.52 E-value=5.6e-07 Score=68.01 Aligned_cols=80 Identities=16% Similarity=0.297 Sum_probs=65.4
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCC--C--CEEEEEEEEECCC-CHHHHHHHHHHHHCCCCCCEEC
Q ss_conf 499999859987668889999985798189734443243--6--8899999997288-5277798889874002320201
Q gi|254780911|r 3 SYILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLD--T--SKLFMRISFVFNT-CMKLFIADFQPIVQQFSLQYSI 77 (288)
Q Consensus 3 ~~iLti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~~--~--~~FFmRi~f~~~~-~~~~l~~~f~~ia~~~~m~~~i 77 (288)
.+++.+.|+|++||+++||+.|++.|.||.+++..+... + ..|.|...+..+. ..+++++.|..+++++++++.+
T Consensus 93 ~~vv~v~~~DrpGLL~~it~~La~~~inI~~~~~~~~~~~~~~~~~F~~~~~i~~p~~~~~~l~~~L~~l~~el~vdi~v 172 (195)
T 2nyi_A 93 EYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLYQEVVTALSRVEEEFGVDIDL 172 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEE
T ss_conf 89999950688789999999997669519980212661676788528999999679675899999999999996968999
Q ss_pred CCCCC
Q ss_conf 24456
Q gi|254780911|r 78 RNTKE 82 (288)
Q Consensus 78 ~~~~~ 82 (288)
.+..+
T Consensus 173 ~~~~~ 177 (195)
T 2nyi_A 173 EEVVE 177 (195)
T ss_dssp EECC-
T ss_pred EECCC
T ss_conf 98777