HHsearch results for GI: 254780911 and protein with PDBid: 3obi_A
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=0 Score=651.32 Aligned_cols=279 Identities=42% Similarity=0.799 Sum_probs=271.6
Q ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEEEEECC---CCHHHHHHHHHHHHCCCCCCEECC
Q ss_conf 64999998599876688899999857981897344432436889999999728---852777988898740023202012
Q gi|254780911|r 2 SSYILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLDTSKLFMRISFVFN---TCMKLFIADFQPIVQQFSLQYSIR 78 (288)
Q Consensus 2 ~~~iLti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~~~~~FFmRi~f~~~---~~~~~l~~~f~~ia~~~~m~~~i~ 78 (288)
++||||++||||+||||+||++|+++|+||++++||+|.++++||||++|+.+ .+.++++++|++++++|+|+|+++
T Consensus 5 ~~~IL~i~CpD~~GIVa~Vs~~l~~~g~NI~~~~qf~D~~~~~FFmR~~f~~~~~~~~~~~l~~~f~~~~~~f~m~~~~~ 84 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTMGWHMR 84 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 81899998999885599999999978998827103347888808999999638887899999998887776515531124
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHHHHH-HHHCCCCEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 445655389997088679899998620467415899999773466777-8860997474168733527767899999733
Q gi|254780911|r 79 NTKEATKTLILVSQPDHCLNDLLYRWNIGTLALNIVGVVSNHTTHKKL-VENYQLPFYYLPMTEQNKIESEQKLINIIEK 157 (288)
Q Consensus 79 ~~~~~~riailvSg~gsnL~~Ll~~~~~g~L~~eI~~VISN~~d~~~l-A~~~gIP~~~i~~~~~~k~~~e~~il~~l~~ 157 (288)
+.++++|+||||||+||||++||+|+++|+|+++|++|||||+++... ++.++|||+++|..+++|.++|+++++++++
T Consensus 85 ~~~~~~riailvSg~g~~l~~ll~~~~~g~L~~~i~~ViSn~~~~~~~~~~~~~ip~~~~~~~~~~~~~~e~~~l~~l~~ 164 (288)
T 3obi_A 85 DRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKDTRRQQEAAITALIAQ 164 (288)
T ss_dssp ETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTTTHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 54567359999947833899999999749998437899568565899788747999899288887579999989999985
Q ss_pred CCCEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEECC
Q ss_conf 39409998276754887786327784796133667678999958999742683762257753055688834444466518
Q gi|254780911|r 158 NNVELMILARYMQILSDHLCHKMTGRIINIHHSFLPSFKGANPYKQAYEYGVKIIGATAHYAICELDAGPIIEQDVVRVT 237 (288)
Q Consensus 158 ~~~DlivLAgymril~~~~~~~~~~~iiNiHpslLP~f~G~~~y~~A~~~Gvk~~G~TvH~V~~~lD~GpII~Q~~~~v~ 237 (288)
+++|||||||||||||++|++.|++++||+||||||+|+|++||++|+++|+|.+|||+|||++++|+||||+|+.++|+
T Consensus 165 ~~~Dlivlag~~~il~~~~l~~~~~~iiNiHpslLP~~rG~~p~~~ai~~g~k~~G~TvH~v~~~lD~G~II~Q~~~~I~ 244 (288)
T 3obi_A 165 THTDLVVLARYMQILSDEMSARLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERIS 244 (288)
T ss_dssp HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECC
T ss_pred CCCCEEEEEEECCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEECC
T ss_conf 49869998400543782666425786534179778555765769999984996600389997179867873799998769
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEECC
Q ss_conf 8889999999999999999999999987691788688579808
Q gi|254780911|r 238 HAQTIEDYIAIGKNIEAKVLTKAVNAHIQQRVFINKRKTIVFP 280 (288)
Q Consensus 238 ~~dt~~~l~~~~~~~E~~~l~~av~~~~e~rv~~~~~ktvvf~ 280 (288)
++||+++|.+|++++|+++|++||++++++||+++|||||||.
T Consensus 245 ~~dt~~~l~~k~~~~e~~~l~~al~~~~~~ri~~~~~ktvvf~ 287 (288)
T 3obi_A 245 HRDTPADLVRKGRDIERRVLSRALHYHLDDRVILNGRKTVVFT 287 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEC
T ss_conf 9999999999999999999999999998099999199999937