RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780912|ref|YP_003065325.1| hypothetical protein
CLIBASIA_04055 [Candidatus Liberibacter asiaticus str. psy62]
         (68 letters)



>gnl|CDD|173083 PRK14620, PRK14620, NAD(P)H-dependent glycerol-3-phosphate
           dehydrogenase; Provisional.
          Length = 326

 Score = 25.6 bits (56), Expect = 2.8
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 3   NNPLSLLSLPSFMKSLLRSLELCSQIMQCVSKE 35
           NNP+++LS PSF K +   L  CS ++   ++ 
Sbjct: 127 NNPIAILSGPSFAKEIAEKLP-CSIVLAGQNET 158


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.317    0.131    0.357 

Gapped
Lambda     K      H
   0.267   0.0628    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 981,606
Number of extensions: 41005
Number of successful extensions: 73
Number of sequences better than 10.0: 1
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 4
Length of query: 68
Length of database: 5,994,473
Length adjustment: 39
Effective length of query: 29
Effective length of database: 5,151,761
Effective search space: 149401069
Effective search space used: 149401069
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.3 bits)