HHsearch alignment for GI: 254780913 and conserved domain: PRK09376

>PRK09376 rho transcription termination factor Rho; Provisional.
Probab=94.71  E-value=0.036  Score=33.06  Aligned_cols=59  Identities=19%  Similarity=0.357  Sum_probs=39.4

Q ss_pred             CCCEEEEEE--CCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCC-CCEEEEECC
Q ss_conf             887465885--48877883799995000235884468998899999986999711-105999635
Q gi|254780913|r   13 DKGYGFITP--EGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKY-SAENLKLVP   74 (78)
Q Consensus        13 ~kGfGFI~~--d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~-~A~~v~~i~   74 (78)
T Consensus        60 ~dGyGFLR~~~~nylp~~dDiYVS~sqIrrf~---LR~GD~V~G~vR~pke~Ery~aLl~V~~VN  121 (416)
T PRK09376         60 PDGFGFLRSPDANYLPGPDDIYVSPSQIRRFN---LRTGDTVEGKIRPPKEGERYFALLKVETVN  121 (416)
T ss_pred             CCCCEEEECCCCCCCCCCCCEEECHHHHHHHC---CCCCCEEEEEEECCCCCCCCCCEEEEEECC
T ss_conf             89865705787688899888336899999809---988888999886898888774337763228