HHsearch alignment for GI: 254780913 and conserved domain: pfam07497

>pfam07497 Rho_RNA_bind Rho termination factor, RNA-binding domain. The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers.
Probab=95.97  E-value=0.0087  Score=36.48  Aligned_cols=58  Identities=16%  Similarity=0.365  Sum_probs=39.1

Q ss_pred             CCCEEEEEE--CCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCC-CCEEEEEC
Q ss_conf             887465885--48877883799995000235884468998899999986999711-10599963
Q gi|254780913|r   13 DKGYGFITP--EGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKY-SAENLKLV   73 (78)
Q Consensus        13 ~kGfGFI~~--d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~-~A~~v~~i   73 (78)
T Consensus        11 ~dGyGFLR~~~~~y~~~~~DvyVs~~~Irrf~---LR~GD~V~G~vR~p~~~ek~~aL~~V~~V   71 (78)
T pfam07497        11 PDGFGFLRSPDANYLPGPDDIYVSPSQIRRFN---LRTGDTIEGKIRPPKEGERYFALLKVETI   71 (78)
T ss_pred             CCCCEEEECCCCCCCCCCCCEEECHHHHHHCC---CCCCCEEEEEEECCCCCCCCEEEEEEEEE
T ss_conf             89837947786587999888788999998719---98888999998799989875210689758