HHsearch alignment of GI: 254780913 and MMDB domain: 2kcm_A_

>2kcm_A (A:) Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Shewanella oneidensis mr-1}
Probab=99.84  E-value=1.9e-21  Score=140.27  Aligned_cols=69  Identities=19%  Similarity=0.321  Sum_probs=63.6

Q ss_pred             CCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCC
Q ss_conf             76277514688746588548877883799995000235884468998899999986999711105999635788
Q gi|254780913|r    4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVPKSS   77 (78)
Q Consensus         4 ~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~~~~   77 (78)
                      +|+|||||.+||||||+||   ++++|+|+|+|+|+.+++++|.+|++|+|++.+++++  ++|.+|++++.++
T Consensus         2 ~G~Vk~f~~~kGfGFI~~d---~~~~dif~h~s~l~~~g~~~l~~G~~V~f~~~~~~kG--~~A~~V~~~~~~~   70 (74)
T 2kcm_A            2 KGKVVSYLAAKKYGFIQGD---DGESYFLHFSELLDKKDEGKLVKGSMVHFDPTPTPKG--LAAKAISLPLEHH   70 (74)
T ss_dssp             EEEEEEEETTTTEEEEEET---TSCEECCCGGGSSCSGGGTTCCTTSEEEEEEECTTTS--CEEEEEECCSCSC
T ss_pred             EEEEEEEECCCCEEEEECC---CCCEEEEEHHHHCCCCCCCCCCCCCEEEEEEEECCCC--CEEEEEEECCCCC
T ss_conf             3899999899986678369---9967999947703478854579999999999989998--6615998033134