HHsearch alignment of GI: 254780913 and MMDB domain: 3cam_A_1-39

>3cam_A (A:1-39) Cold-shock domain family protein; cold shock protein, chain SWAP, structural genomics, oxford protein production facility, OPPF; 2.60A {Neisseria meningitidis MC58}

Probab=99.48  E-value=1.6e-14  Score=101.63  Aligned_cols=38  Identities=50%  Similarity=1.068  Sum_probs=34.3

Q ss_pred             CCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCC
Q ss_conf             77627751468874658854887788379999500023588
Q gi|254780913|r    3 HRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGL   43 (78)
Q Consensus         3 ~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~   43 (78)
                      .+|+|||||.+||||||+|+   ++++|||||+|+|+.+|+
T Consensus         2 v~G~VkwFn~~kGfGFI~~~---dg~~DvFvH~s~l~~~G~   39 (39)
T 3cam_A            2 ATGIVKWFNDAKGFGFITPD---EGGEDLFAHFSAINXEGF   39 (39)
T ss_dssp             EEEEEEEEETTTTEEEEEET---TSCCCEEEEGGGBCGGGG
T ss_pred             CCEEEEEEECCCCCEEEEEC---CCCCEEEEEEHHCCCCCC
T ss_conf             98199999699994899867---998279999734051469